Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RSPO4Q2I0M5 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC5.45□□□□□ -1.54
RSPO4Q2I0M5 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RSPO4Q2I0M5 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.45□□□□□ -1.54
RSPO4Q2I0M5 AOX3P-204ENST00000491025 2107 ntBASIC5.45□□□□□ -1.54
RSPO4Q2I0M5 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.45□□□□□ -1.54
RSPO4Q2I0M5 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
RSPO4Q2I0M5 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
RSPO4Q2I0M5 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RSPO4Q2I0M5 AL122126.1-201ENST00000546905 1318 ntBASIC5.45□□□□□ -1.54
RSPO4Q2I0M5 AC027287.1-201ENST00000553115 1453 ntBASIC5.45□□□□□ -1.54
RSPO4Q2I0M5 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.45□□□□□ -1.54
RSPO4Q2I0M5 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AC009962.1-201ENST00000567327 3813 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 Y_RNA.170-201ENST00000363746 110 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 Y_RNA.200-201ENST00000364018 102 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 RNA5SP479-201ENST00000364858 117 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 RNA5SP30-201ENST00000365552 115 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 OR52E6-202ENST00000379946 954 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 MT-TP-201ENST00000387461 68 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AP000580.1-201ENST00000404439 358 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 RNU6-55P-201ENST00000411092 107 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AC068533.1-201ENST00000418542 415 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 RPL7P49-201ENST00000471402 708 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AC104563.1-201ENST00000476147 376 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AC026979.1-201ENST00000492525 396 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 RNU6-941P-201ENST00000516346 108 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 RNA5SP384-201ENST00000516615 116 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 RNA5SP503-201ENST00000517047 117 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 RNU1-54P-201ENST00000517181 120 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AC109329.1-201ENST00000518744 317 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 LSM3P2-201ENST00000551246 273 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 MIR4284-201ENST00000578924 81 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 MIR4270-201ENST00000581799 70 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AC011487.3-201ENST00000593607 453 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AC010424.2-201ENST00000607594 443 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AC074101.1-201ENST00000637861 241 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 OR9K1P-202ENST00000641111 3217 ntBASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.44□□□□□ -1.54
RSPO4Q2I0M5 AL731532.1-201ENST00000623972 4236 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AL021877.2-201ENST00000624442 10684 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AC009779.8-201ENST00000641684 4384 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 WBP11P1-201ENST00000562560 1931 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 Y_RNA.65-201ENST00000362846 100 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 SNORA17.1-201ENST00000362945 126 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 SNORD50.1-201ENST00000362987 71 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 RNU6-666P-201ENST00000363499 107 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 Y_RNA.551-201ENST00000384661 102 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 MIR450B-201ENST00000401182 78 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 DHFRP6-201ENST00000401776 268 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AL139156.1-201ENST00000412785 841 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 COX6B1P1-201ENST00000415962 213 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 OR6D1P-201ENST00000436165 939 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AL031663.1-201ENST00000437445 219 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AL162388.1-201ENST00000450912 352 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 RNU7-120P-201ENST00000459334 63 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AC074255.1-201ENST00000511259 501 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AC021146.3-201ENST00000511911 260 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 RNU6-1278P-201ENST00000516130 107 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms