Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 snoU13.24-201ENST00000458998 104 ntBASIC2.62□□□□□ -1.99
H3F3AP84243 HMGB1P25-201ENST00000468402 607 ntBASIC2.62□□□□□ -1.99
H3F3AP84243 AC104689.1-201ENST00000473356 768 ntBASIC2.62□□□□□ -1.99
H3F3AP84243 RPS29P2-201ENST00000479278 136 ntBASIC2.62□□□□□ -1.99
H3F3AP84243 RN7SL499P-201ENST00000481141 276 ntBASIC2.62□□□□□ -1.99
H3F3AP84243 AC011825.1-201ENST00000484967 388 ntBASIC2.62□□□□□ -1.99
H3F3AP84243 AC083906.5-201ENST00000503722 328 ntBASIC2.62□□□□□ -1.99
H3F3AP84243 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.62□□□□□ -1.99
H3F3AP84243 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.62□□□□□ -1.99
H3F3AP84243 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.62□□□□□ -1.99
H3F3AP84243 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.62□□□□□ -1.99
H3F3AP84243 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.62□□□□□ -1.99
H3F3AP84243 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.62□□□□□ -1.99
H3F3AP84243 AC107954.1-201ENST00000565906 727 ntBASIC2.62□□□□□ -1.99
H3F3AP84243 AC010653.1-201ENST00000571108 881 ntBASIC2.62□□□□□ -1.99
H3F3AP84243 AC073387.2-201ENST00000604797 784 ntBASIC2.62□□□□□ -1.99
H3F3AP84243 AC008962.1-201ENST00000605729 304 ntBASIC2.62□□□□□ -1.99
H3F3AP84243 AC110792.4-201ENST00000609843 298 ntBASIC2.62□□□□□ -1.99
H3F3AP84243 AC107871.2-201ENST00000612894 502 ntBASIC2.62□□□□□ -1.99
H3F3AP84243 AC006963.1-201ENST00000624003 1052 ntBASIC2.62□□□□□ -1.99
H3F3AP84243 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.62□□□□□ -1.99
H3F3AP84243 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
H3F3AP84243 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
H3F3AP84243 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.61□□□□□ -1.99
H3F3AP84243 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.61□□□□□ -1.99
H3F3AP84243 NSRP1P1-201ENST00000444067 1693 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 OR5H2-201ENST00000355273 945 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
H3F3AP84243 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
H3F3AP84243 SNORA9.2-201ENST00000365361 133 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
H3F3AP84243 PRRC2CP1-201ENST00000404428 159 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 SNORA11C-201ENST00000408532 129 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 RNU6-1077P-201ENST00000410506 102 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.61□□□□□ -1.99
H3F3AP84243 AL139281.1-201ENST00000422120 335 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.61□□□□□ -1.99
H3F3AP84243 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.61□□□□□ -1.99
H3F3AP84243 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
H3F3AP84243 RABEPKP1-201ENST00000440529 1026 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 AL162389.1-201ENST00000449233 177 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 AC112492.1-201ENST00000449607 712 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
H3F3AP84243 AC087879.1-201ENST00000474343 374 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.61□□□□□ -1.99
H3F3AP84243 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
H3F3AP84243 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.61□□□□□ -1.99
H3F3AP84243 AC016550.3-201ENST00000515706 767 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 RN7SKP283-201ENST00000517197 270 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.61□□□□□ -1.99
H3F3AP84243 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.61□□□□□ -1.99
H3F3AP84243 AC113192.3-201ENST00000529152 742 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.61□□□□□ -1.99
H3F3AP84243 GTF2IP8-201ENST00000560687 584 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.61□□□□□ -1.99
H3F3AP84243 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.61□□□□□ -1.99
H3F3AP84243 MIR3200-201ENST00000580767 85 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 AC015871.2-201ENST00000603605 948 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 AC093732.2-201ENST00000607950 274 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 AL162274.2-201ENST00000614406 332 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 AC231759.1-201ENST00000616455 597 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.61□□□□□ -1.99
H3F3AP84243 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
H3F3AP84243 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.61□□□□□ -1.99
H3F3AP84243 AC092447.7-201ENST00000422212 1621 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
H3F3AP84243 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.6□□□□□ -1.99
H3F3AP84243 GABRG2-229ENST00000641017 3628 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
H3F3AP84243 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.6□□□□□ -1.99
H3F3AP84243 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
H3F3AP84243 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.6□□□□□ -1.99
H3F3AP84243 RNU6-98P-201ENST00000384173 107 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 SNORA44-201ENST00000384584 132 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
H3F3AP84243 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.6□□□□□ -1.99
H3F3AP84243 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.6□□□□□ -1.99
H3F3AP84243 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.6□□□□□ -1.99
H3F3AP84243 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.6□□□□□ -1.99
H3F3AP84243 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.6□□□□□ -1.99
H3F3AP84243 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.6□□□□□ -1.99
H3F3AP84243 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.6□□□□□ -1.99
H3F3AP84243 RPL39P40-201ENST00000445481 146 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 AL590639.1-201ENST00000456484 337 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 AC104472.2-201ENST00000469035 601 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 RPS23P3-201ENST00000470993 430 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 AC010301.1-201ENST00000473936 355 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.6□□□□□ -1.99
H3F3AP84243 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
H3F3AP84243 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.6□□□□□ -1.99
H3F3AP84243 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.6□□□□□ -1.99
H3F3AP84243 KLHL2P1-201ENST00000508691 521 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 FABP5P6-201ENST00000510588 409 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 AC008494.2-201ENST00000514544 370 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.6□□□□□ -1.99
H3F3AP84243 RN7SKP96-201ENST00000516948 297 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 SNORA31.20-201ENST00000517111 133 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.6□□□□□ -1.99
H3F3AP84243 AC012182.1-201ENST00000570133 895 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms