Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
ABCA4P78363 MIR92A2-201ENST00000385299 75 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.21□□□□□ -2.06
ABCA4P78363 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.21□□□□□ -2.06
ABCA4P78363 RPL23AP14-201ENST00000468281 468 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.21□□□□□ -2.06
ABCA4P78363 AC147055.1-201ENST00000509261 750 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
ABCA4P78363 AP001646.1-201ENST00000527936 915 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.21□□□□□ -2.06
ABCA4P78363 AC009977.1-201ENST00000586015 570 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 AL392112.1-201ENST00000605115 829 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.21□□□□□ -2.06
ABCA4P78363 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ABCA4P78363 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
ABCA4P78363 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.21□□□□□ -2.06
ABCA4P78363 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ABCA4P78363 SNORA3.2-201ENST00000408221 125 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 RPS15AP6-201ENST00000420703 385 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.21□□□□□ -2.06
ABCA4P78363 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.21□□□□□ -2.06
ABCA4P78363 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.21□□□□□ -2.06
ABCA4P78363 HMGB3P30-201ENST00000457863 606 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 RNU6-1218P-201ENST00000458990 108 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 HAUS1P1-201ENST00000505275 832 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.21□□□□□ -2.06
ABCA4P78363 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.21□□□□□ -2.06
ABCA4P78363 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.21□□□□□ -2.06
ABCA4P78363 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.21□□□□□ -2.06
ABCA4P78363 VN1R84P-201ENST00000593697 235 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.21□□□□□ -2.06
ABCA4P78363 BNIP3P8-201ENST00000597863 560 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 AC019131.2-201ENST00000609071 870 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 AC079228.1-201ENST00000624774 1049 ntBASIC2.21□□□□□ -2.06
ABCA4P78363 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ABCA4P78363 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ABCA4P78363 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ABCA4P78363 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ABCA4P78363 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ABCA4P78363 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ABCA4P78363 RNU1-73P-201ENST00000383971 164 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.2□□□□□ -2.06
ABCA4P78363 ISCA1P6-201ENST00000427740 390 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 AC018634.1-201ENST00000437554 401 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.2□□□□□ -2.06
ABCA4P78363 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.2□□□□□ -2.06
ABCA4P78363 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.2□□□□□ -2.06
ABCA4P78363 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.2□□□□□ -2.06
ABCA4P78363 MIR4644-201ENST00000579929 84 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
ABCA4P78363 AC004943.3-201ENST00000624116 600 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 TAB3P1-202ENST00000452645 1634 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ABCA4P78363 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ABCA4P78363 RPL31P1-201ENST00000398116 372 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 AL355379.1-201ENST00000405542 640 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 RPL23AP36-201ENST00000413895 458 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.2□□□□□ -2.06
ABCA4P78363 FCF1P1-201ENST00000432690 571 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 AL592437.1-201ENST00000443781 492 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 UQCRHP3-201ENST00000451503 251 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 AC010683.1-201ENST00000473673 378 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 RPS4XP6-201ENST00000477670 797 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 AL049830.2-201ENST00000480072 201 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.2□□□□□ -2.06
ABCA4P78363 NIPA2P2-201ENST00000496376 1083 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 AC112673.1-201ENST00000513168 575 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 SNORA70.14-201ENST00000516205 110 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.2□□□□□ -2.06
ABCA4P78363 AP003102.1-201ENST00000525638 661 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
ABCA4P78363 NPM1P35-201ENST00000533043 868 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 AC025423.2-201ENST00000537570 439 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.2□□□□□ -2.06
ABCA4P78363 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.2□□□□□ -2.06
ABCA4P78363 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.2□□□□□ -2.06
ABCA4P78363 AC010928.3-201ENST00000587712 541 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.2□□□□□ -2.06
ABCA4P78363 AC007687.1-201ENST00000602704 304 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 AC015849.6-201ENST00000605454 474 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 SNORA35B-201ENST00000607417 129 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 U6.98-201ENST00000637157 84 ntBASIC2.2□□□□□ -2.06
ABCA4P78363 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.2□□□□□ -2.06
ABCA4P78363 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ABCA4P78363 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
ABCA4P78363 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
ABCA4P78363 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ABCA4P78363 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
ABCA4P78363 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.19□□□□□ -2.06
ABCA4P78363 AL159169.1-201ENST00000421119 127 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.19□□□□□ -2.06
ABCA4P78363 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.19□□□□□ -2.06
ABCA4P78363 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.19□□□□□ -2.06
ABCA4P78363 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ABCA4P78363 CKS1BP7-201ENST00000522230 235 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.19□□□□□ -2.06
ABCA4P78363 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
ABCA4P78363 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms