Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CD44P16070 AF127577.6-201ENST00000623352 2191 ntBASIC7.44□□□□□ -1.22
CD44P16070 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CD44P16070 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.44□□□□□ -1.22
CD44P16070 USP45-204ENST00000369233 2514 ntTSL 5 BASIC7.44□□□□□ -1.22
CD44P16070 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CD44P16070 CASC19-228ENST00000641414 1684 ntBASIC7.44□□□□□ -1.22
CD44P16070 AC011504.1-201ENST00000623331 4103 ntBASIC7.44□□□□□ -1.22
CD44P16070 AC020658.2-201ENST00000559030 4020 ntBASIC7.43□□□□□ -1.22
CD44P16070 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CD44P16070 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.43□□□□□ -1.22
CD44P16070 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CD44P16070 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CD44P16070 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CD44P16070 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CD44P16070 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CD44P16070 RNA5SP197-201ENST00000363357 119 ntBASIC7.43□□□□□ -1.22
CD44P16070 RNU6-103P-201ENST00000363686 107 ntBASIC7.43□□□□□ -1.22
CD44P16070 RN7SKP227-201ENST00000364445 330 ntBASIC7.43□□□□□ -1.22
CD44P16070 RNU1-55P-201ENST00000365510 158 ntBASIC7.43□□□□□ -1.22
CD44P16070 RNU6-14P-201ENST00000384630 106 ntBASIC7.43□□□□□ -1.22
CD44P16070 MIR548A3-201ENST00000385297 97 ntBASIC7.43□□□□□ -1.22
CD44P16070 SNORD72-201ENST00000390994 80 ntBASIC7.43□□□□□ -1.22
CD44P16070 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.43□□□□□ -1.22
CD44P16070 Y_RNA.595-201ENST00000410403 105 ntBASIC7.43□□□□□ -1.22
CD44P16070 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC7.43□□□□□ -1.22
CD44P16070 BPY2DP-201ENST00000422208 265 ntBASIC7.43□□□□□ -1.22
CD44P16070 RPS15AP5-201ENST00000436276 388 ntBASIC7.43□□□□□ -1.22
CD44P16070 AC092824.1-201ENST00000483524 576 ntBASIC7.43□□□□□ -1.22
CD44P16070 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.43□□□□□ -1.22
CD44P16070 AC067852.5-201ENST00000589299 310 ntBASIC7.43□□□□□ -1.22
CD44P16070 AC008814.1-201ENST00000603797 406 ntBASIC7.43□□□□□ -1.22
CD44P16070 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CD44P16070 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CD44P16070 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CD44P16070 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CD44P16070 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CD44P16070 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.43□□□□□ -1.22
CD44P16070 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.43□□□□□ -1.22
CD44P16070 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CD44P16070 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
CD44P16070 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CD44P16070 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CD44P16070 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
CD44P16070 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CD44P16070 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.42□□□□□ -1.22
CD44P16070 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CD44P16070 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.42□□□□□ -1.22
CD44P16070 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CD44P16070 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 Y_RNA.294-201ENST00000364916 102 ntBASIC7.42□□□□□ -1.22
CD44P16070 RNU6-843P-201ENST00000384454 104 ntBASIC7.42□□□□□ -1.22
CD44P16070 RNU6-19P-201ENST00000384718 107 ntBASIC7.42□□□□□ -1.22
CD44P16070 RNU4-65P-201ENST00000410473 140 ntBASIC7.42□□□□□ -1.22
CD44P16070 AL096701.2-201ENST00000416920 238 ntBASIC7.42□□□□□ -1.22
CD44P16070 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC7.42□□□□□ -1.22
CD44P16070 RPS5P7-201ENST00000456664 608 ntBASIC7.42□□□□□ -1.22
CD44P16070 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.42□□□□□ -1.22
CD44P16070 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC7.42□□□□□ -1.22
CD44P16070 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC7.42□□□□□ -1.22
CD44P16070 AC010409.2-201ENST00000505780 478 ntBASIC7.42□□□□□ -1.22
CD44P16070 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CD44P16070 RNU6-521P-201ENST00000516663 105 ntBASIC7.42□□□□□ -1.22
CD44P16070 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.42□□□□□ -1.22
CD44P16070 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.42□□□□□ -1.22
CD44P16070 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC7.42□□□□□ -1.22
CD44P16070 AC109309.2-201ENST00000612597 332 ntBASIC7.42□□□□□ -1.22
CD44P16070 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.42□□□□□ -1.22
CD44P16070 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.42□□□□□ -1.22
CD44P16070 GOT2P1-201ENST00000440922 1309 ntBASIC7.42□□□□□ -1.22
CD44P16070 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
CD44P16070 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
CD44P16070 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
CD44P16070 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.42□□□□□ -1.22
CD44P16070 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.42□□□□□ -1.22
CD44P16070 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CD44P16070 AL139384.2-201ENST00000613809 3590 ntBASIC7.41□□□□□ -1.22
CD44P16070 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.41□□□□□ -1.22
CD44P16070 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CD44P16070 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CD44P16070 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CD44P16070 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CD44P16070 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CD44P16070 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CD44P16070 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CD44P16070 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CD44P16070 RNU4-80P-201ENST00000363200 141 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms