Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
APOBP04114 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
APOBP04114 MIR21-201ENST00000362134 72 ntBASIC1.48□□□□□ -2.17
APOBP04114 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.48□□□□□ -2.17
APOBP04114 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC1.48□□□□□ -2.17
APOBP04114 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.48□□□□□ -2.17
APOBP04114 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.48□□□□□ -2.17
APOBP04114 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
APOBP04114 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
APOBP04114 MOB1AP2-201ENST00000446060 614 ntBASIC1.48□□□□□ -2.17
APOBP04114 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
APOBP04114 CKS1BP7-201ENST00000522230 235 ntBASIC1.48□□□□□ -2.17
APOBP04114 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.48□□□□□ -2.17
APOBP04114 OR4U1P-201ENST00000554958 912 ntBASIC1.48□□□□□ -2.17
APOBP04114 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC1.48□□□□□ -2.17
APOBP04114 AC061975.8-201ENST00000587058 721 ntBASIC1.48□□□□□ -2.17
APOBP04114 YWHAEP7-203ENST00000622054 312 ntBASIC1.48□□□□□ -2.17
APOBP04114 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
APOBP04114 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC1.48□□□□□ -2.17
APOBP04114 ADAM3A-203ENST00000461344 2157 ntBASIC1.48□□□□□ -2.17
APOBP04114 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
APOBP04114 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
APOBP04114 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
APOBP04114 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
APOBP04114 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC1.48□□□□□ -2.17
APOBP04114 RFX3-203ENST00000381984 364 ntTSL 3 BASIC1.48□□□□□ -2.17
APOBP04114 RNA5SP296-201ENST00000410523 111 ntBASIC1.48□□□□□ -2.17
APOBP04114 RN7SKP140-201ENST00000411196 284 ntBASIC1.48□□□□□ -2.17
APOBP04114 AC007064.1-201ENST00000412238 351 ntBASIC1.48□□□□□ -2.17
APOBP04114 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.48□□□□□ -2.17
APOBP04114 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
APOBP04114 Y_RNA.269-201ENST00000364685 89 ntBASIC1.47□□□□□ -2.17
APOBP04114 AL451074.5-201ENST00000415894 435 ntBASIC1.47□□□□□ -2.17
APOBP04114 AL445646.1-201ENST00000431784 216 ntBASIC1.47□□□□□ -2.17
APOBP04114 AL606490.7-201ENST00000433136 191 ntBASIC1.47□□□□□ -2.17
APOBP04114 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.47□□□□□ -2.17
APOBP04114 EIF2S2P4-201ENST00000461070 984 ntBASIC1.47□□□□□ -2.17
APOBP04114 THAP6-203ENST00000502620 582 ntTSL 3 BASIC1.47□□□□□ -2.17
APOBP04114 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.47□□□□□ -2.17
APOBP04114 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.47□□□□□ -2.17
APOBP04114 AC012182.1-201ENST00000570133 895 ntBASIC1.47□□□□□ -2.17
APOBP04114 ISCA1P3-201ENST00000577104 373 ntBASIC1.47□□□□□ -2.17
APOBP04114 MIR4644-201ENST00000579929 84 ntBASIC1.47□□□□□ -2.17
APOBP04114 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC1.47□□□□□ -2.17
APOBP04114 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
APOBP04114 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.47□□□□□ -2.17
APOBP04114 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
APOBP04114 HSPD1P16-201ENST00000402302 394 ntBASIC1.47□□□□□ -2.17
APOBP04114 RPL23AP74-201ENST00000437246 471 ntBASIC1.47□□□□□ -2.17
APOBP04114 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.47□□□□□ -2.17
APOBP04114 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
APOBP04114 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.47□□□□□ -2.17
APOBP04114 MTCYBP20-201ENST00000524239 1129 ntBASIC1.47□□□□□ -2.17
APOBP04114 MIR3605-201ENST00000583214 100 ntBASIC1.47□□□□□ -2.17
APOBP04114 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.47□□□□□ -2.17
APOBP04114 OR11H5P-202ENST00000641612 1325 ntBASIC1.47□□□□□ -2.17
APOBP04114 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.47□□□□□ -2.17
APOBP04114 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
APOBP04114 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.47□□□□□ -2.17
APOBP04114 RNA5SP76-201ENST00000516277 87 ntBASIC1.47□□□□□ -2.17
APOBP04114 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.47□□□□□ -2.17
APOBP04114 RPS3AP4-201ENST00000555161 764 ntBASIC1.47□□□□□ -2.17
APOBP04114 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.47□□□□□ -2.17
APOBP04114 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.47□□□□□ -2.17
APOBP04114 Z82209.1-201ENST00000422141 2135 ntBASIC1.47□□□□□ -2.17
APOBP04114 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
APOBP04114 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
APOBP04114 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.47□□□□□ -2.17
APOBP04114 AC105402.2-201ENST00000438503 358 ntBASIC1.47□□□□□ -2.17
APOBP04114 AL589765.3-201ENST00000446084 462 ntBASIC1.47□□□□□ -2.17
APOBP04114 ST13P20-201ENST00000447996 1065 ntBASIC1.47□□□□□ -2.17
APOBP04114 AC125238.1-201ENST00000448842 249 ntBASIC1.47□□□□□ -2.17
APOBP04114 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.47□□□□□ -2.17
APOBP04114 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.47□□□□□ -2.17
APOBP04114 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.47□□□□□ -2.17
APOBP04114 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC1.47□□□□□ -2.17
APOBP04114 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC1.47□□□□□ -2.17
APOBP04114 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC1.47□□□□□ -2.17
APOBP04114 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
APOBP04114 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC1.47□□□□□ -2.17
APOBP04114 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC1.47□□□□□ -2.17
APOBP04114 AC097714.1-201ENST00000511272 1647 ntBASIC1.47□□□□□ -2.17
APOBP04114 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
APOBP04114 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.18
APOBP04114 AC100870.1-201ENST00000522035 505 ntBASIC1.46□□□□□ -2.18
APOBP04114 AC021269.2-201ENST00000532318 330 ntBASIC1.46□□□□□ -2.18
APOBP04114 snoU13.31-201ENST00000607291 104 ntBASIC1.46□□□□□ -2.18
APOBP04114 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
APOBP04114 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC1.46□□□□□ -2.18
APOBP04114 AC025125.1-201ENST00000624743 1922 ntBASIC1.46□□□□□ -2.18
APOBP04114 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
APOBP04114 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.46□□□□□ -2.18
APOBP04114 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.46□□□□□ -2.18
APOBP04114 RNU1-75P-201ENST00000347264 129 ntBASIC1.46□□□□□ -2.18
APOBP04114 Y_RNA.116-201ENST00000363292 103 ntBASIC1.46□□□□□ -2.18
APOBP04114 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.46□□□□□ -2.18
APOBP04114 AL592437.1-201ENST00000443781 492 ntBASIC1.46□□□□□ -2.18
APOBP04114 AL353705.4-201ENST00000449661 238 ntBASIC1.46□□□□□ -2.18
APOBP04114 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.46□□□□□ -2.18
APOBP04114 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms