Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CLPTM1O96005 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CLPTM1O96005 MIR383-201ENST00000362257 73 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 Y_RNA.25-201ENST00000362528 102 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 RNU1-14P-201ENST00000362759 152 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 Y_RNA.560-201ENST00000384689 102 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 DSTNP4-201ENST00000399472 474 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 RPS15AP6-201ENST00000420703 385 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.66□□□□□ -1.82
CLPTM1O96005 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.66□□□□□ -1.82
CLPTM1O96005 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.66□□□□□ -1.82
CLPTM1O96005 VN1R108P-201ENST00000431580 830 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 AC091390.1-201ENST00000433904 331 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.66□□□□□ -1.82
CLPTM1O96005 SETP5-201ENST00000437270 562 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 ISCA1P2-201ENST00000438679 421 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 AC118469.1-201ENST00000442943 488 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.66□□□□□ -1.82
CLPTM1O96005 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.66□□□□□ -1.82
CLPTM1O96005 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.66□□□□□ -1.82
CLPTM1O96005 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.66□□□□□ -1.82
CLPTM1O96005 AC146507.1-201ENST00000468335 354 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 RPL7P38-201ENST00000488396 739 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.66□□□□□ -1.82
CLPTM1O96005 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.66□□□□□ -1.82
CLPTM1O96005 HMGB1P28-201ENST00000507778 552 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 PCBP2P3-201ENST00000509726 843 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 AC093281.2-201ENST00000510153 597 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 MTND1P22-201ENST00000510572 951 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 PTGES3P3-201ENST00000511479 482 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 OR5BM1P-201ENST00000512021 366 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.66□□□□□ -1.82
CLPTM1O96005 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.66□□□□□ -1.82
CLPTM1O96005 RN7SKP209-201ENST00000516888 304 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.66□□□□□ -1.82
CLPTM1O96005 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.66□□□□□ -1.82
CLPTM1O96005 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 SLC2A13P1-201ENST00000531560 322 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.66□□□□□ -1.82
CLPTM1O96005 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.66□□□□□ -1.82
CLPTM1O96005 AL512347.1-201ENST00000566420 503 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.66□□□□□ -1.82
CLPTM1O96005 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.66□□□□□ -1.82
CLPTM1O96005 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.66□□□□□ -1.82
CLPTM1O96005 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.66□□□□□ -1.82
CLPTM1O96005 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLPTM1O96005 AC112220.3-201ENST00000605502 502 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLPTM1O96005 AC084782.3-201ENST00000612282 578 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLPTM1O96005 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CLPTM1O96005 AC120349.2-201ENST00000625002 298 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 AC068137.4-201ENST00000638485 296 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLPTM1O96005 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLPTM1O96005 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLPTM1O96005 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLPTM1O96005 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLPTM1O96005 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.66□□□□□ -1.82
CLPTM1O96005 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.66□□□□□ -1.82
CLPTM1O96005 ELL2P3-201ENST00000457883 1602 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLPTM1O96005 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.66□□□□□ -1.82
CLPTM1O96005 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLPTM1O96005 AL353746.1-201ENST00000566293 6881 ntBASIC3.66□□□□□ -1.82
CLPTM1O96005 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.65□□□□□ -1.82
CLPTM1O96005 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CLPTM1O96005 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLPTM1O96005 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.65□□□□□ -1.83
CLPTM1O96005 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CLPTM1O96005 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLPTM1O96005 OR4A15-201ENST00000314706 1035 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 SNORD35B-201ENST00000363660 87 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 RNU6-253P-201ENST00000384730 105 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 RPL23AP29-201ENST00000397284 453 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 AL121978.1-201ENST00000402778 359 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 HNRNPDP2-201ENST00000406475 478 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 HSFY4P-201ENST00000415994 1181 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.65□□□□□ -1.83
CLPTM1O96005 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.65□□□□□ -1.83
CLPTM1O96005 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.65□□□□□ -1.83
CLPTM1O96005 AL049610.1-201ENST00000423374 372 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 RPL23AP38-201ENST00000423801 469 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.65□□□□□ -1.83
CLPTM1O96005 AC105402.2-201ENST00000438503 358 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.65□□□□□ -1.83
CLPTM1O96005 HMGB1P37-201ENST00000439613 609 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 AC239367.2-201ENST00000447309 705 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 OR6C5P-201ENST00000452388 923 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 AC097262.1-201ENST00000452559 548 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.65□□□□□ -1.83
CLPTM1O96005 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.65□□□□□ -1.83
CLPTM1O96005 AC013828.1-201ENST00000481845 158 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.65□□□□□ -1.83
CLPTM1O96005 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.65□□□□□ -1.83
CLPTM1O96005 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.65□□□□□ -1.83
CLPTM1O96005 AC117532.1-201ENST00000514638 323 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms