Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC9.86□□□□□ -0.83
MSH5O43196 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MSH5O43196 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
MSH5O43196 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MSH5O43196 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
MSH5O43196 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
MSH5O43196 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MSH5O43196 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MSH5O43196 AL672296.1-201ENST00000427780 2158 ntBASIC9.85□□□□□ -0.83
MSH5O43196 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC9.85□□□□□ -0.83
MSH5O43196 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 AC007406.5-201ENST00000570140 3170 ntBASIC9.85□□□□□ -0.83
MSH5O43196 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
MSH5O43196 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 RPL24P4-201ENST00000326586 421 ntBASIC9.85□□□□□ -0.83
MSH5O43196 SNORD45.3-201ENST00000363836 72 ntBASIC9.85□□□□□ -0.83
MSH5O43196 SNORA4.2-201ENST00000365313 147 ntBASIC9.85□□□□□ -0.83
MSH5O43196 AC009963.1-201ENST00000417265 157 ntBASIC9.85□□□□□ -0.83
MSH5O43196 FAM183DP-201ENST00000421987 399 ntBASIC9.85□□□□□ -0.83
MSH5O43196 AC092017.2-201ENST00000427600 362 ntBASIC9.85□□□□□ -0.83
MSH5O43196 RN7SL55P-201ENST00000464534 297 ntBASIC9.85□□□□□ -0.83
MSH5O43196 RN7SL688P-201ENST00000471754 275 ntBASIC9.85□□□□□ -0.83
MSH5O43196 RPS15AP34-201ENST00000487776 387 ntBASIC9.85□□□□□ -0.83
MSH5O43196 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC9.85□□□□□ -0.83
MSH5O43196 AC006499.3-201ENST00000506077 748 ntBASIC9.85□□□□□ -0.83
MSH5O43196 IGKV3-31-201ENST00000523109 329 ntBASIC9.85□□□□□ -0.83
MSH5O43196 AC040162.2-201ENST00000573092 157 ntBASIC9.85□□□□□ -0.83
MSH5O43196 MIR5009-201ENST00000578736 100 ntBASIC9.85□□□□□ -0.83
MSH5O43196 AC138207.8-204ENST00000579588 527 ntBASIC9.85□□□□□ -0.83
MSH5O43196 MIR5688-201ENST00000580619 83 ntBASIC9.85□□□□□ -0.83
MSH5O43196 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC9.85□□□□□ -0.83
MSH5O43196 AC008121.1-201ENST00000603244 268 ntBASIC9.85□□□□□ -0.83
MSH5O43196 AC118658.2-201ENST00000618697 459 ntBASIC9.85□□□□□ -0.83
MSH5O43196 BMS1P21-201ENST00000634565 365 ntBASIC9.85□□□□□ -0.83
MSH5O43196 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 AC138915.4-201ENST00000565549 4147 ntBASIC9.85□□□□□ -0.83
MSH5O43196 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
MSH5O43196 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MSH5O43196 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC9.84□□□□□ -0.83
MSH5O43196 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC9.84□□□□□ -0.83
MSH5O43196 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MSH5O43196 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
MSH5O43196 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MSH5O43196 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MSH5O43196 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
MSH5O43196 AL139327.1-201ENST00000382988 348 ntBASIC9.84□□□□□ -0.83
MSH5O43196 MIR621-201ENST00000384919 96 ntBASIC9.84□□□□□ -0.83
MSH5O43196 MIR551B-201ENST00000384984 96 ntBASIC9.84□□□□□ -0.83
MSH5O43196 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC9.84□□□□□ -0.83
MSH5O43196 GAS5-208ENST00000425771 242 ntTSL 3 BASIC9.84□□□□□ -0.83
MSH5O43196 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MSH5O43196 AC073465.2-201ENST00000440938 498 ntBASIC9.84□□□□□ -0.83
MSH5O43196 AC139272.1-201ENST00000505516 640 ntBASIC9.84□□□□□ -0.83
MSH5O43196 AP000620.1-201ENST00000527147 504 ntBASIC9.84□□□□□ -0.83
MSH5O43196 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC9.84□□□□□ -0.83
MSH5O43196 MIR4504-201ENST00000577413 92 ntBASIC9.84□□□□□ -0.83
MSH5O43196 RN7SL473P-201ENST00000580341 299 ntBASIC9.84□□□□□ -0.83
MSH5O43196 CTSLP2-201ENST00000580501 394 ntBASIC9.84□□□□□ -0.83
MSH5O43196 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC9.84□□□□□ -0.83
MSH5O43196 OR5AH1P-201ENST00000595968 283 ntBASIC9.84□□□□□ -0.83
MSH5O43196 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MSH5O43196 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MSH5O43196 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC9.84□□□□□ -0.83
MSH5O43196 U6.115-201ENST00000636045 103 ntBASIC9.84□□□□□ -0.83
MSH5O43196 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC9.84□□□□□ -0.83
MSH5O43196 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MSH5O43196 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MSH5O43196 ZNF658B-201ENST00000602828 3408 ntBASIC9.84□□□□□ -0.83
MSH5O43196 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MSH5O43196 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC9.84□□□□□ -0.83
MSH5O43196 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC9.84□□□□□ -0.83
MSH5O43196 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
MSH5O43196 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC9.84□□□□□ -0.83
MSH5O43196 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
MSH5O43196 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
MSH5O43196 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
MSH5O43196 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MSH5O43196 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MSH5O43196 AC008957.3-201ENST00000624112 2242 ntBASIC9.83□□□□□ -0.84
MSH5O43196 AL596244.1-201ENST00000567068 3779 ntBASIC9.83□□□□□ -0.84
MSH5O43196 PABPC1P8-201ENST00000452851 2086 ntBASIC9.83□□□□□ -0.84
MSH5O43196 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
MSH5O43196 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 206.1 ms