Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MEMO1P3-201ENST00000459811 302 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 AC090142.1-201ENST00000465776 462 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM38O00635 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM38O00635 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM38O00635 AC138853.1-201ENST00000503549 823 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM38O00635 CDC42P4-201ENST00000510507 563 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 AC091965.2-201ENST00000512324 613 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 AC026402.1-201ENST00000513642 170 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 AC015795.1-201ENST00000513669 327 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 RNU6-150P-201ENST00000516237 95 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 RN7SKP116-201ENST00000516902 319 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM38O00635 IGKV2D-36-201ENST00000518643 226 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 AC008802.1-201ENST00000519121 791 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 AC090151.1-201ENST00000520784 730 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 AC022861.1-201ENST00000522981 663 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM38O00635 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM38O00635 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM38O00635 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM38O00635 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM38O00635 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM38O00635 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM38O00635 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM38O00635 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM38O00635 AC114781.5-201ENST00000615297 108 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
TRIM38O00635 PCMTD1P7-201ENST00000634506 357 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM38O00635 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM38O00635 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM38O00635 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM38O00635 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM38O00635 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM38O00635 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM38O00635 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TRIM38O00635 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM38O00635 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM38O00635 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM38O00635 Y_RNA.359-201ENST00000365498 102 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 RNU6-1119P-201ENST00000384349 108 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM38O00635 RNA5SP56-201ENST00000410277 118 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 MTCO2P5-201ENST00000422621 426 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 GLRXP1-201ENST00000423261 334 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 MTND1P2-201ENST00000430604 821 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AC122718.1-201ENST00000439448 744 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM38O00635 MTND2P24-201ENST00000453434 806 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 SCARNA10-201ENST00000459255 330 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 FAM133DP-201ENST00000464802 691 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 RN7SL303P-201ENST00000469773 251 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 FAM172BP-201ENST00000487497 1089 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AC112198.1-201ENST00000505369 1220 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AC093809.1-201ENST00000509155 340 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM38O00635 MTCYBP43-201ENST00000513621 740 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 IGLV3-26-201ENST00000520756 302 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 HIGD1AP10-201ENST00000527837 282 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AC087276.1-201ENST00000529659 480 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM38O00635 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM38O00635 OR6C73P-201ENST00000546432 358 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 RPS3AP4-201ENST00000555161 764 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AC245505.1-201ENST00000556398 224 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM38O00635 AC074050.1-201ENST00000563247 211 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AC092325.1-201ENST00000566449 554 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AC009101.1-201ENST00000568135 242 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AC053481.3-201ENST00000577881 843 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 MIR1254-2-201ENST00000579553 63 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM38O00635 AC010680.3-201ENST00000604215 520 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AC112230.1-201ENST00000604342 547 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 ARF4P1-201ENST00000605447 541 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AC007038.2-201ENST00000608095 740 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM38O00635 AC008498.1-201ENST00000613012 531 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AC100793.4-201ENST00000613683 429 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 AC138932.5-201ENST00000617759 563 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM38O00635 AC127502.3-201ENST00000636170 1206 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM38O00635 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM38O00635 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM38O00635 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM38O00635 ZNF833P-201ENST00000424938 1494 ntBASIC4.49□□□□□ -1.69
TRIM38O00635 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
TRIM38O00635 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM38O00635 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
TRIM38O00635 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM38O00635 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM38O00635 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM38O00635 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
TRIM38O00635 MT-TH-201ENST00000387441 69 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms