Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL590639.1-201ENST00000456484 337 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 NF1P3-201ENST00000457709 450 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 snoU13.7-201ENST00000459220 104 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.32□□□□□ -2.04
SDCBPO00560 SLC25A15P5-201ENST00000508033 253 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 AC016550.3-201ENST00000515706 767 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 SCARNA13-201ENST00000516672 275 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 AC104997.1-201ENST00000519761 717 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.32□□□□□ -2.04
SDCBPO00560 AL355836.1-201ENST00000555951 870 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.32□□□□□ -2.04
SDCBPO00560 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.32□□□□□ -2.04
SDCBPO00560 YWHAQP7-201ENST00000603536 658 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SDCBPO00560 AC107905.1-201ENST00000616204 426 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 CR381653.2-201ENST00000624041 768 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.32□□□□□ -2.04
SDCBPO00560 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SDCBPO00560 AC006378.2-201ENST00000623178 2476 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.32□□□□□ -2.04
SDCBPO00560 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SDCBPO00560 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
SDCBPO00560 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
SDCBPO00560 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SDCBPO00560 AC092435.3-201ENST00000565538 3654 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
SDCBPO00560 BTBD10P2-201ENST00000404779 676 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 MTATP6P31-201ENST00000406985 692 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 MRPL50P2-201ENST00000416821 482 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 AL513175.2-201ENST00000422071 443 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 TBCAP3-201ENST00000512475 312 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 AC010374.2-201ENST00000512933 535 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 SNORA74D-201ENST00000516404 141 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.31□□□□□ -2.04
SDCBPO00560 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.31□□□□□ -2.04
SDCBPO00560 OR4V1P-201ENST00000525394 1140 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.31□□□□□ -2.04
SDCBPO00560 SETP2-201ENST00000553886 926 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.31□□□□□ -2.04
SDCBPO00560 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.31□□□□□ -2.04
SDCBPO00560 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.31□□□□□ -2.04
SDCBPO00560 MIR4325-201ENST00000583049 90 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 BNIP3P33-201ENST00000598912 569 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 AL109653.1-201ENST00000603091 248 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 AC024153.1-201ENST00000603103 365 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 AL442067.2-201ENST00000614033 363 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 U6.48-201ENST00000618523 106 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 AL391597.1-201ENST00000618707 694 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 MTND4P31-201ENST00000425607 1343 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SDCBPO00560 AC009501.3-201ENST00000605001 1352 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 AL355596.1-201ENST00000565399 3996 ntBASIC2.31□□□□□ -2.04
SDCBPO00560 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SDCBPO00560 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.3□□□□□ -2.04
SDCBPO00560 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SDCBPO00560 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SDCBPO00560 OR5H2-201ENST00000355273 945 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 RNU6-335P-201ENST00000364563 113 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 RNU6-98P-201ENST00000384173 107 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 AL354719.1-201ENST00000406535 843 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 AC005517.2-201ENST00000424673 553 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.3□□□□□ -2.04
SDCBPO00560 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.3□□□□□ -2.04
SDCBPO00560 AL606490.8-201ENST00000441624 319 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 RPL34P26-201ENST00000445636 354 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.3□□□□□ -2.04
SDCBPO00560 HMGB1P25-201ENST00000468402 607 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 MTND3P6-201ENST00000485242 339 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.3□□□□□ -2.04
SDCBPO00560 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.3□□□□□ -2.04
SDCBPO00560 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.3□□□□□ -2.04
SDCBPO00560 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.3□□□□□ -2.04
SDCBPO00560 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
SDCBPO00560 AF279873.1-201ENST00000523393 313 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 AC239860.2-201ENST00000525886 270 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 OR4A45P-201ENST00000529954 901 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.3□□□□□ -2.04
SDCBPO00560 AL049870.4-201ENST00000555741 486 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.3□□□□□ -2.04
SDCBPO00560 AP000787.2-201ENST00000604432 568 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 AC006023.2-201ENST00000609916 167 ntBASIC2.3□□□□□ -2.04
SDCBPO00560 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SDCBPO00560 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
SDCBPO00560 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SDCBPO00560 RNU6-629P-201ENST00000384061 103 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 SNORA11-201ENST00000408789 128 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 RNU2-71P-201ENST00000411395 189 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 RAD23BP2-201ENST00000416003 1207 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 RNF19BPX-201ENST00000426224 625 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 RPL21P66-201ENST00000426566 466 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.29□□□□□ -2.04
SDCBPO00560 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.29□□□□□ -2.04
SDCBPO00560 AC112653.1-201ENST00000443851 386 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 ST13P20-201ENST00000447996 1065 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 NANOGNBP1-201ENST00000448444 480 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 RSL24D1P3-201ENST00000449255 495 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 AP000705.1-201ENST00000454567 350 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 RPS29P26-201ENST00000477483 171 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 AC025459.1-201ENST00000504072 156 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms