Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 RNU6-50P-201ENST00000362356 103 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 SNORD67-201ENST00000390833 111 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 MIR887-201ENST00000401258 79 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 FABP12P1-201ENST00000401911 322 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 RN7SKP202-201ENST00000410439 330 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 HSFY1P1-201ENST00000423928 1178 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 RPP40P1-201ENST00000426762 456 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AL390023.1-201ENST00000428836 262 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 RPL17P35-201ENST00000432217 549 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC011242.1-201ENST00000433596 1158 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC005019.1-201ENST00000436455 431 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 TRIM60P18-201ENST00000441518 828 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 H2AFZP6-201ENST00000444403 394 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 GXYLT1P1-201ENST00000446657 490 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 GTF2IP12-201ENST00000456547 356 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 RPS17P11-201ENST00000474297 293 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 SETP6-201ENST00000479329 568 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 MTCO3P44-201ENST00000510977 541 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC027338.1-201ENST00000514840 825 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 PRELID3BP4-201ENST00000515476 571 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 RNA5SP468-201ENST00000516782 93 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC026403.1-201ENST00000518938 295 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AP000619.3-201ENST00000535634 1127 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC084824.1-201ENST00000550917 1005 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC011611.5-201ENST00000552477 578 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 CKS1BP3-201ENST00000600888 237 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC026741.1-201ENST00000605892 482 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AL390240.1-201ENST00000612950 384 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC138932.5-201ENST00000617759 563 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC099506.2-201ENST00000623074 221 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 CR392039.5-201ENST00000623201 510 ntBASIC2.79□□□□□ -1.96
TNFRSF11BO00300 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.79□□□□□ -1.96
TNFRSF11BO00300 AC024341.1-201ENST00000526444 1552 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 RNU1-85P-201ENST00000364127 164 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 RNU6-441P-201ENST00000384545 106 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 RNA5SP344-201ENST00000411081 104 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AL451074.5-201ENST00000415894 435 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 RPF2P1-201ENST00000424137 906 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AC093151.1-201ENST00000427711 313 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AC018644.1-201ENST00000429934 551 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AC016696.1-201ENST00000446949 318 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AL133547.1-201ENST00000448546 220 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AC108860.1-201ENST00000484521 383 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AC121161.1-201ENST00000510606 652 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 RNU1-61P-201ENST00000516107 151 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 HMGB1P1-201ENST00000522557 636 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AC022069.1-201ENST00000582910 658 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AC098483.2-201ENST00000603158 454 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AC004832.5-201ENST00000608677 401 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AC013468.1-201ENST00000608680 598 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AP004247.3-201ENST00000608682 624 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AC019176.2-201ENST00000611579 315 ntBASIC2.78□□□□□ -1.96
TNFRSF11BO00300 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.78□□□□□ -1.96
TNFRSF11BO00300 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
TNFRSF11BO00300 AC004925.1-201ENST00000624256 2706 ntBASIC2.77□□□□□ -1.97
TNFRSF11BO00300 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
TNFRSF11BO00300 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.77□□□□□ -1.97
TNFRSF11BO00300 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TNFRSF11BO00300 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
TNFRSF11BO00300 RNU6-339P-201ENST00000384310 107 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms