Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 DUXAP6-201ENST00000553858 601 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC051619.2-201ENST00000559063 397 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 GTF2IP8-201ENST00000560687 584 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC055876.1-202ENST00000567053 138 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC126365.2-201ENST00000580630 379 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC053481.4-201ENST00000583164 216 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AL031985.2-201ENST00000600955 480 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC106791.2-201ENST00000604680 391 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AP002826.1-201ENST00000608835 315 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AL138880.2-201ENST00000616214 239 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AL512427.1-201ENST00000618593 349 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC091046.2-201ENST00000620775 665 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC004009.2-201ENST00000623016 728 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AL732618.1-201ENST00000623251 301 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AP003122.6-201ENST00000623831 495 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AP000553.6-201ENST00000641242 118 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.59□□□□□ -2
SMKR1H3BMG3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SMKR1H3BMG3 AL136520.1-201ENST00000600311 1322 ntBASIC2.59□□□□□ -2
SMKR1H3BMG3 RLIMP1-201ENST00000339626 1680 ntBASIC2.59□□□□□ -2
SMKR1H3BMG3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
SMKR1H3BMG3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SMKR1H3BMG3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC2.59□□□□□ -2
SMKR1H3BMG3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.59□□□□□ -2
SMKR1H3BMG3 AP002907.1-201ENST00000606361 1430 ntBASIC2.59□□□□□ -2
SMKR1H3BMG3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SMKR1H3BMG3 RNU6-216P-201ENST00000363282 104 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 RNA5-8SP7-201ENST00000363443 155 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 MIR105-2-201ENST00000385083 81 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.58□□□□□ -2
SMKR1H3BMG3 MTCO1P56-201ENST00000401674 224 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 ZNF602P-201ENST00000405929 924 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.58□□□□□ -2
SMKR1H3BMG3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.58□□□□□ -2
SMKR1H3BMG3 AL590139.1-201ENST00000416267 400 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.58□□□□□ -2
SMKR1H3BMG3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.58□□□□□ -2
SMKR1H3BMG3 USP9YP21-201ENST00000420603 432 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 AC019178.2-201ENST00000423595 505 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMKR1H3BMG3 C1DP1-201ENST00000426049 402 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMKR1H3BMG3 DPPA2P1-201ENST00000428060 556 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 AP000907.1-201ENST00000428428 510 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.58□□□□□ -2
SMKR1H3BMG3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.58□□□□□ -2
SMKR1H3BMG3 MTND2P5-201ENST00000432656 1006 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.58□□□□□ -2
SMKR1H3BMG3 NUTF2P3-201ENST00000448540 384 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.58□□□□□ -2
SMKR1H3BMG3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.58□□□□□ -2
SMKR1H3BMG3 NDUFA12P1-201ENST00000455914 406 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.58□□□□□ -2
SMKR1H3BMG3 AP001992.1-205ENST00000462248 379 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 RPS4XP10-201ENST00000465034 731 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 RPL32P34-201ENST00000486380 400 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.58□□□□□ -2
SMKR1H3BMG3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.58□□□□□ -2
SMKR1H3BMG3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.58□□□□□ -2
SMKR1H3BMG3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.58□□□□□ -2
SMKR1H3BMG3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.58□□□□□ -2
SMKR1H3BMG3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.58□□□□□ -2
SMKR1H3BMG3 AP001207.2-201ENST00000519490 539 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC2.58□□□□□ -2
SMKR1H3BMG3 OR10V3P-201ENST00000525712 725 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.58□□□□□ -2
SMKR1H3BMG3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMKR1H3BMG3 AC004024.1-201ENST00000549244 247 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 HSPE1P3-201ENST00000559254 309 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC2.58□□□□□ -2
SMKR1H3BMG3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.58□□□□□ -2
SMKR1H3BMG3 AC015688.2-201ENST00000584523 262 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 AC011492.1-201ENST00000600023 315 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 AC013444.2-201ENST00000603317 787 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 AL356218.2-201ENST00000605264 187 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.58□□□□□ -2
SMKR1H3BMG3 RNU4-89P-201ENST00000607443 133 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 AC097504.2-201ENST00000608088 454 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SMKR1H3BMG3 AC007275.1-201ENST00000621243 671 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 MIR6500-201ENST00000622700 86 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 AC010872.1-201ENST00000624225 675 ntBASIC2.58□□□□□ -2
SMKR1H3BMG3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.58□□□□□ -2
SMKR1H3BMG3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMKR1H3BMG3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
SMKR1H3BMG3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SMKR1H3BMG3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.57□□□□□ -2
SMKR1H3BMG3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
SMKR1H3BMG3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMKR1H3BMG3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.57□□□□□ -2
SMKR1H3BMG3 AC007496.3-201ENST00000624987 3443 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC009812.4-201ENST00000569134 1805 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms