Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AC109446.4-201ENST00000623235 2755 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AC116667.1-201ENST00000604855 2072 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AL121886.1-201ENST00000358609 435 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 RNU6-1284P-201ENST00000363701 100 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 RNU1-64P-201ENST00000365443 163 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 SNORA11F-201ENST00000408237 128 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 RNA5SP56-201ENST00000410277 118 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 RNU4-25P-201ENST00000410569 230 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AL591848.1-201ENST00000413092 322 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AL353678.1-201ENST00000422735 741 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AC006946.1-201ENST00000429106 328 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AC005094.1-201ENST00000440420 368 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 IGHV5-78-201ENST00000450948 295 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 TRBV5-2-201ENST00000489095 273 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 MTCO3P9-201ENST00000506989 781 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 RNA5SP43-201ENST00000516559 110 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 DEFB108D-201ENST00000527787 222 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AC137627.1-201ENST00000545761 289 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AC007224.1-201ENST00000564410 144 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AL355375.2-201ENST00000574825 175 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AP001429.1-201ENST00000602568 530 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AC135507.2-201ENST00000612443 309 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AC104237.2-201ENST00000612456 443 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AC005858.4-201ENST00000623191 700 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 AL136313.1-201ENST00000624804 202 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 MTCO1P24-201ENST00000515438 1558 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 SAMMSON-226ENST00000642089 1582 ntBASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TMEM88BA6NKF7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 RNU6-1029P-201ENST00000384109 107 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 RNU6-1013P-201ENST00000384180 107 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 MIR514A2-201ENST00000385131 88 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 MIR514A3-201ENST00000385132 88 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 RNU6-903P-201ENST00000391270 109 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 BEND7P1-201ENST00000422058 457 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AL451062.2-201ENST00000427515 271 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 RPL37P6-202ENST00000464216 403 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AC010618.1-201ENST00000469924 477 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AC004062.1-201ENST00000509926 645 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AC100870.1-201ENST00000522035 505 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 OR5B10P-201ENST00000532869 642 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AL161713.1-201ENST00000555538 145 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 VN1R85P-201ENST00000601587 426 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AL670379.6-201ENST00000603753 252 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AL670379.11-201ENST00000604059 253 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AC008162.1-201ENST00000604718 254 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AL670379.1-201ENST00000604752 252 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AL670379.5-201ENST00000605253 252 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AL670379.12-201ENST00000605291 253 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AL670379.8-201ENST00000605353 252 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AL670379.7-201ENST00000605823 252 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AL050343.2-201ENST00000607338 280 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 AC055839.1-201ENST00000634467 498 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 EXOC5P1-201ENST00000510543 1969 ntBASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.09□□□□□ -1.43
TMEM88BA6NKF7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
TMEM88BA6NKF7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
TMEM88BA6NKF7 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms