Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 DDX18P3-201ENST00000404856 2007 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC083899.1-201ENST00000454465 3819 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC002525.1-201ENST00000624392 1622 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 SOCS5P3-201ENST00000425115 1576 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 RNU4-1-201ENST00000363925 141 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 RNA5SP223-201ENST00000365174 120 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 MT-TC-201ENST00000387405 66 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 MRPL42P2-201ENST00000403169 426 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AL078595.1-201ENST00000404458 226 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC245052.5-201ENST00000416320 649 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 MTND4LP11-201ENST00000422184 280 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AL358934.1-201ENST00000432346 324 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC112653.1-201ENST00000443851 386 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 C1DP4-201ENST00000455429 424 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC013267.1-201ENST00000458227 267 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC146507.1-201ENST00000468335 354 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC055855.1-201ENST00000489563 579 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC019235.1-201ENST00000503847 207 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AP001893.2-201ENST00000526949 202 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AP003072.2-201ENST00000527756 676 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AP003385.6-201ENST00000531603 374 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC053481.4-201ENST00000583164 216 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 SNORA51-201ENST00000606420 132 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC010424.2-201ENST00000607594 443 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC006329.2-201ENST00000611491 394 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC002550.2-201ENST00000621246 394 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC138965.3-201ENST00000623875 498 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC091953.2-201ENST00000623979 160 ntBASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.35□□□□□ -1.55
CCDC85CA6NKD9 AL079305.1-201ENST00000623159 3008 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC027287.1-201ENST00000553115 1453 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AP001273.1-201ENST00000624493 3152 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 Y_RNA.548-201ENST00000384656 105 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 RNU6-821P-201ENST00000390995 107 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 RN7SKP235-201ENST00000410662 305 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 RNU6-195P-201ENST00000411352 109 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC013429.2-201ENST00000418798 781 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 RPS12P5-201ENST00000423449 371 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC133104.1-201ENST00000429100 218 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 UBE2V1P13-201ENST00000436983 439 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AL136380.1-201ENST00000447970 162 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 MTND1P12-201ENST00000455231 147 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 MTCO2P29-201ENST00000465212 189 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 HMGB1P25-201ENST00000468402 607 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 RPS17P5-201ENST00000498293 408 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC091868.1-201ENST00000508746 304 ntBASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC85CA6NKD9 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms