Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC067852.4-201ENST00000590314 478 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC005255.1-201ENST00000593748 216 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 BPIFA4P-203ENST00000603168 689 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 COX6CP4-201ENST00000605798 228 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC027807.2-201ENST00000616099 408 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC099669.2-201ENST00000616549 437 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AL008636.1-201ENST00000625038 1018 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 MIR6830-201ENST00000636015 70 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AC004520.1-201ENST00000608362 1413 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AL139811.1-201ENST00000424779 2299 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AC016716.1-201ENST00000265882 708 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AC007685.1-201ENST00000329806 452 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 Y_RNA.97-201ENST00000363094 102 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 RNA5SP447-201ENST00000363749 119 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 RNU6-444P-201ENST00000383988 108 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 RNA5SP372-201ENST00000390836 115 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 ZNF603P-201ENST00000405613 487 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 RPL7AP25-201ENST00000423357 805 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 OR8F1P-201ENST00000425243 930 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 UBE2V1P8-201ENST00000437166 265 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 RPL23AP43-201ENST00000446445 471 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 MTCO1P48-201ENST00000448024 1096 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 PAXBP1P1-201ENST00000449315 447 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 RPL23AP15-201ENST00000450202 459 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AC003071.1-201ENST00000451219 789 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AC098824.1-201ENST00000453565 980 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AL033528.1-201ENST00000453780 140 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AC108751.2-201ENST00000469993 231 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AC093809.1-201ENST00000509155 340 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 MTND5P4-201ENST00000514978 288 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AC009101.1-201ENST00000568135 242 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 MTCO3P24-201ENST00000572729 782 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AC141257.3-201ENST00000572906 215 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 MIR3160-1-201ENST00000577972 85 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AC010680.4-201ENST00000605334 543 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AC108479.2-201ENST00000617314 601 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AC019226.1-201ENST00000625666 515 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 AC008725.1-201ENST00000605123 2263 ntBASIC4.55□□□□□ -1.68
DKK3Q9UBP4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
DKK3Q9UBP4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 DCAF13P1-201ENST00000495256 1330 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC139713.2-214ENST00000642059 1811 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 RNY4P24-201ENST00000362735 96 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 RNU6-297P-201ENST00000384636 107 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 HMGB1P17-201ENST00000403495 628 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 PRRC2CP1-201ENST00000404428 159 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 MIR548F1-201ENST00000408667 84 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 RN7SKP263-201ENST00000411194 309 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC109780.2-201ENST00000413467 845 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AIMP1P1-201ENST00000418670 937 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC092832.1-201ENST00000422934 400 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 Z74021.1-201ENST00000423610 407 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 USP9YP18-201ENST00000425912 695 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AL139415.2-201ENST00000431968 163 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms