Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.23□□□□□ -1.73
LRFN1Q9P244 AC009902.3-201ENST00000606235 2172 ntBASIC4.23□□□□□ -1.73
LRFN1Q9P244 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
LRFN1Q9P244 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN1Q9P244 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN1Q9P244 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
LRFN1Q9P244 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN1Q9P244 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN1Q9P244 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN1Q9P244 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN1Q9P244 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN1Q9P244 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN1Q9P244 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN1Q9P244 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN1Q9P244 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC008549.2-201ENST00000333482 706 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 RNA5SP167-201ENST00000365461 116 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN1Q9P244 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN1Q9P244 MTCYBP36-201ENST00000404146 440 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC016907.1-201ENST00000419483 435 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC004975.1-201ENST00000428733 208 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 RPL21P112-201ENST00000434403 463 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 snoU13.24-201ENST00000458998 104 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 RPL7P23-201ENST00000493874 747 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 KCTD9P2-201ENST00000512203 1013 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC116347.2-201ENST00000514912 523 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 RNA5SP497-201ENST00000516081 97 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 U73023.1-201ENST00000603134 700 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 TUG1_1.1-201ENST00000610654 145 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC025594.3-201ENST00000613068 790 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC079597.1-201ENST00000624306 508 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC025048.6-202ENST00000627667 438 ntBASIC4.22□□□□□ -1.73
LRFN1Q9P244 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN1Q9P244 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN1Q9P244 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN1Q9P244 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN1Q9P244 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.22□□□□□ -1.73
LRFN1Q9P244 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.21□□□□□ -1.73
LRFN1Q9P244 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
LRFN1Q9P244 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
LRFN1Q9P244 AP001350.1-201ENST00000601906 1524 ntBASIC4.21□□□□□ -1.73
LRFN1Q9P244 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN1Q9P244 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN1Q9P244 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN1Q9P244 SNORA31-201ENST00000362607 130 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 RNU1-94P-201ENST00000362627 173 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 U3.4-201ENST00000363352 213 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 RNA5SP189-201ENST00000364920 115 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 MIR607-201ENST00000385241 96 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 RNU11-4P-201ENST00000391149 133 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 SDHCP2-201ENST00000398565 501 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 RNU4-25P-201ENST00000410569 230 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 AL359704.1-201ENST00000411586 781 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 MORF4L1P6-201ENST00000418771 268 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 RPS12P10-201ENST00000427031 377 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 UBE2V1P13-201ENST00000436983 439 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 RPL23AP93-201ENST00000440847 484 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 TAF9P1-201ENST00000445421 515 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 AC239367.2-201ENST00000447309 705 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 BTF3P6-201ENST00000448054 499 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 AC010655.1-201ENST00000449336 292 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 TAF9P2-201ENST00000454958 515 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 MTCO1P42-201ENST00000457379 726 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 UBDP1-202ENST00000457888 382 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms