Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU6-988P-201ENST00000519081 107 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 AC116917.1-201ENST00000520558 305 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 PTP4A1P6-201ENST00000531034 478 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 AC110588.1-201ENST00000559699 137 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 AC004817.2-201ENST00000561794 651 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 MIR4502-201ENST00000580432 81 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 MIR4680-201ENST00000580906 66 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 MIR3672-201ENST00000584290 82 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 AF038458.1-201ENST00000588406 262 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSU72Q9NP77 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSU72Q9NP77 PSMA6P4-201ENST00000603247 718 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 AC005191.1-201ENST00000603950 358 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 AC133644.2-201ENST00000608142 540 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 AP001486.3-201ENST00000615334 372 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 uc_338.34-201ENST00000617467 174 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 AC129915.3-201ENST00000634128 948 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSU72Q9NP77 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 AC244517.1-201ENST00000606030 2086 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSU72Q9NP77 MTND5P28-201ENST00000438005 1594 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSU72Q9NP77 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC009313.2-201ENST00000417893 1941 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSU72Q9NP77 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSU72Q9NP77 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSU72Q9NP77 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSU72Q9NP77 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSU72Q9NP77 Y_RNA.5-201ENST00000362334 102 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSU72Q9NP77 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC069218.2-201ENST00000411665 344 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 RPS12P24-201ENST00000412619 387 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 ARL5AP1-201ENST00000418991 388 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 BX323845.3-201ENST00000428215 527 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC009238.2-201ENST00000431026 355 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 EZH2P1-201ENST00000431167 291 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC005165.2-201ENST00000466070 380 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC068305.1-201ENST00000497406 726 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 MTCYBP40-201ENST00000509390 1135 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC098591.2-201ENST00000510152 315 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 MTCO2P24-201ENST00000515611 426 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 RNU6-615P-201ENST00000516065 106 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 SNORA70.20-201ENST00000516848 126 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC090136.1-201ENST00000520009 240 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC011979.2-201ENST00000527568 352 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 IMMP1LP2-201ENST00000552954 492 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 IGBP1P1-201ENST00000554337 1009 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 CYCSP38-201ENST00000559840 322 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 RN7SL802P-201ENST00000577858 299 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC024619.4-201ENST00000580924 316 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC012616.1-201ENST00000600294 197 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC011500.1-201ENST00000601963 469 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 AC005899.6-201ENST00000620729 297 ntBASIC5.29□□□□□ -1.56
SSU72Q9NP77 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSU72Q9NP77 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
SSU72Q9NP77 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSU72Q9NP77 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSU72Q9NP77 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms