Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 Y_RNA.324-201ENST00000365165 102 ntBASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 RNA5SP85-201ENST00000365378 119 ntBASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 RN7SL177P-201ENST00000476596 299 ntBASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 VN1R105P-201ENST00000486595 910 ntBASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 AC095057.1-201ENST00000507583 168 ntBASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 RN7SKP60-201ENST00000516985 239 ntBASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 AC022616.8-201ENST00000533569 253 ntBASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 ULK4P1-202ENST00000565174 503 ntBASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 RPSAP66-201ENST00000592196 606 ntBASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 AC034229.6-201ENST00000623704 224 ntBASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 AC139426.3-201ENST00000605648 2059 ntBASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SCAF1Q9H7N4 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 AC010894.1-201ENST00000313760 361 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 RNU6-263P-201ENST00000363811 107 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 SNORA68-201ENST00000384437 133 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 MIR199B-201ENST00000384849 110 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 MIR498-201ENST00000385134 124 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 RNU4ATAC2P-201ENST00000408674 126 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 MRPS21P3-201ENST00000436696 262 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 NOP56P2-201ENST00000447491 769 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 U8.21-201ENST00000459536 136 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 AC040975.1-201ENST00000472104 316 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 RPL23AP40-201ENST00000487630 390 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 NDUFA5P6-201ENST00000542110 379 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 MIR4504-201ENST00000577413 92 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 SNORA43.5-201ENST00000631270 138 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 AP001642.1-201ENST00000624727 2117 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 AC012213.2-201ENST00000562917 4597 ntBASIC10.16□□□□□ -0.78
SCAF1Q9H7N4 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 AC089998.1-201ENST00000548575 3141 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 AC007685.1-201ENST00000329806 452 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 RNU6-637P-201ENST00000384050 107 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 RNU6-1226P-201ENST00000384317 107 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 CBX1P3-201ENST00000413296 527 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 RPL7L1P9-201ENST00000431298 745 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 POLR2KP2-201ENST00000438155 177 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 SS18L2P1-201ENST00000445923 213 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 AC006499.6-201ENST00000511169 607 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 Y_RNA.677-201ENST00000516401 85 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 IGHV7-34-1-201ENST00000519200 350 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 RPS11-205ENST00000599561 430 ntTSL 5 BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 AL138895.2-201ENST00000603019 178 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 AC009314.1-201ENST00000603871 304 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 AL035410.2-201ENST00000604963 864 ntBASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC10.15□□□□□ -0.78
SCAF1Q9H7N4 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.79
SCAF1Q9H7N4 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
SCAF1Q9H7N4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.79
SCAF1Q9H7N4 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms