Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF38Q9H0F5 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF38Q9H0F5 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AL592293.2-201ENST00000422292 996 ntBASIC5.16□□□□□ -1.58
RNF38Q9H0F5 MTCO2P5-201ENST00000422621 426 ntBASIC5.16□□□□□ -1.58
RNF38Q9H0F5 EIF1P3-201ENST00000423841 334 ntBASIC5.16□□□□□ -1.58
RNF38Q9H0F5 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 RPS3AP50-201ENST00000487064 803 ntBASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AC096576.1-201ENST00000489014 359 ntBASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 RNU6-1003P-201ENST00000517099 105 ntBASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AC022790.1-201ENST00000522872 204 ntBASIC5.16□□□□□ -1.58
RNF38Q9H0F5 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 BNIP3P1-201ENST00000547295 580 ntBASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AL389895.1-201ENST00000554127 252 ntBASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 NDUFB4P11-201ENST00000560510 395 ntBASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AC124068.1-201ENST00000563131 678 ntBASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 RNU6-87P-201ENST00000607561 108 ntBASIC5.16□□□□□ -1.58
RNF38Q9H0F5 AC004817.4-201ENST00000602396 3625 ntBASIC5.16□□□□□ -1.58
RNF38Q9H0F5 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF38Q9H0F5 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF38Q9H0F5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF38Q9H0F5 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RNF38Q9H0F5 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RNF38Q9H0F5 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RNF38Q9H0F5 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.15□□□□□ -1.58
RNF38Q9H0F5 AP001642.1-201ENST00000624727 2117 ntBASIC5.15□□□□□ -1.58
RNF38Q9H0F5 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.15□□□□□ -1.58
RNF38Q9H0F5 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.15□□□□□ -1.58
RNF38Q9H0F5 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.15□□□□□ -1.58
RNF38Q9H0F5 MAPK10-349ENST00000641767 3661 ntBASIC5.15□□□□□ -1.58
RNF38Q9H0F5 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF38Q9H0F5 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.15□□□□□ -1.58
RNF38Q9H0F5 ERCC6-202ENST00000374127 1782 ntBASIC5.15□□□□□ -1.58
RNF38Q9H0F5 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 RNU6-359P-201ENST00000365466 108 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 RNU6-456P-201ENST00000384493 107 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 RNU2-21P-201ENST00000410368 188 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 RNA5SP113-201ENST00000410486 84 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 RNU6-1068P-201ENST00000410958 103 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AL133384.1-201ENST00000412744 351 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 USP9YP15-201ENST00000442391 422 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 RPL36AP15-201ENST00000444514 266 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 CBWD4P-201ENST00000445695 655 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 RPL7P12-201ENST00000446719 750 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 RPL7P19-201ENST00000469948 618 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 ENPP7P11-201ENST00000505915 627 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 Vault.3-201ENST00000516676 95 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 PHBP17-201ENST00000528576 541 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 PSMA3P-201ENST00000555485 635 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 MIR5186-201ENST00000577504 120 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AC233702.9-201ENST00000581528 203 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 MIR7703-201ENST00000620784 77 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms