Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.13□□□□□ -2.07
COL12A1Q99715 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.13□□□□□ -2.07
COL12A1Q99715 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL12A1Q99715 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL12A1Q99715 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.12□□□□□ -2.07
COL12A1Q99715 TTC39DP-201ENST00000416781 1688 ntBASIC2.12□□□□□ -2.07
COL12A1Q99715 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL12A1Q99715 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL12A1Q99715 RNA5SP107-201ENST00000411358 122 ntBASIC2.12□□□□□ -2.07
COL12A1Q99715 AP1B1P2-201ENST00000416196 106 ntBASIC2.12□□□□□ -2.07
COL12A1Q99715 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.12□□□□□ -2.07
COL12A1Q99715 AC068781.1-201ENST00000488231 618 ntBASIC2.12□□□□□ -2.07
COL12A1Q99715 RN7SL633P-201ENST00000488974 297 ntBASIC2.12□□□□□ -2.07
COL12A1Q99715 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.12□□□□□ -2.07
COL12A1Q99715 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.12□□□□□ -2.07
COL12A1Q99715 RNU6-295P-201ENST00000516901 104 ntBASIC2.12□□□□□ -2.07
COL12A1Q99715 AC106730.3-201ENST00000624568 641 ntBASIC2.12□□□□□ -2.07
COL12A1Q99715 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL12A1Q99715 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
COL12A1Q99715 RPS12P5-201ENST00000423449 371 ntBASIC2.12□□□□□ -2.07
COL12A1Q99715 AC004866.2-201ENST00000438285 481 ntBASIC2.12□□□□□ -2.07
COL12A1Q99715 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL12A1Q99715 FABP5P12-201ENST00000515543 389 ntBASIC2.12□□□□□ -2.07
COL12A1Q99715 SNORA4-201ENST00000584302 138 ntBASIC2.12□□□□□ -2.07
COL12A1Q99715 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.12□□□□□ -2.07
COL12A1Q99715 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.12□□□□□ -2.07
COL12A1Q99715 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL12A1Q99715 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.12□□□□□ -2.07
COL12A1Q99715 ADAM3A-203ENST00000461344 2157 ntBASIC2.12□□□□□ -2.07
COL12A1Q99715 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL12A1Q99715 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL12A1Q99715 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
COL12A1Q99715 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL12A1Q99715 MTND4P10-201ENST00000446199 1363 ntBASIC2.11□□□□□ -2.07
COL12A1Q99715 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC2.11□□□□□ -2.07
COL12A1Q99715 MTND5P29-201ENST00000458676 1807 ntBASIC2.11□□□□□ -2.07
COL12A1Q99715 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.11□□□□□ -2.07
COL12A1Q99715 AC118282.1-201ENST00000506408 765 ntBASIC2.11□□□□□ -2.07
COL12A1Q99715 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
COL12A1Q99715 MIR4635-201ENST00000583759 79 ntBASIC2.11□□□□□ -2.07
COL12A1Q99715 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.11□□□□□ -2.07
COL12A1Q99715 AC002064.3-201ENST00000623448 346 ntBASIC2.11□□□□□ -2.07
COL12A1Q99715 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
COL12A1Q99715 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.11□□□□□ -2.07
COL12A1Q99715 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC2.11□□□□□ -2.07
COL12A1Q99715 AC069528.2-201ENST00000624849 1991 ntBASIC2.11□□□□□ -2.07
COL12A1Q99715 AP000526.1-201ENST00000603308 1388 ntBASIC2.11□□□□□ -2.07
COL12A1Q99715 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL12A1Q99715 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.11□□□□□ -2.07
COL12A1Q99715 USP9YP20-201ENST00000419224 558 ntBASIC2.11□□□□□ -2.07
COL12A1Q99715 RNA5SP281-201ENST00000516504 135 ntBASIC2.11□□□□□ -2.07
COL12A1Q99715 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.11□□□□□ -2.07
COL12A1Q99715 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.11□□□□□ -2.07
COL12A1Q99715 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.11□□□□□ -2.07
COL12A1Q99715 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.11□□□□□ -2.07
COL12A1Q99715 AL121877.1-201ENST00000453704 622 ntBASIC2.11□□□□□ -2.07
COL12A1Q99715 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.11□□□□□ -2.07
COL12A1Q99715 AC000123.3-201ENST00000624029 4975 ntBASIC2.11□□□□□ -2.07
COL12A1Q99715 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.11□□□□□ -2.07
COL12A1Q99715 AC097714.1-201ENST00000511272 1647 ntBASIC2.1□□□□□ -2.07
COL12A1Q99715 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL12A1Q99715 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL12A1Q99715 AC138915.3-201ENST00000562908 1389 ntBASIC2.1□□□□□ -2.07
COL12A1Q99715 SNORA67.3-201ENST00000384366 140 ntBASIC2.1□□□□□ -2.07
COL12A1Q99715 AL365396.1-201ENST00000430854 671 ntBASIC2.1□□□□□ -2.07
COL12A1Q99715 RN7SL75P-201ENST00000461926 281 ntBASIC2.1□□□□□ -2.07
COL12A1Q99715 IGKV2D-23-201ENST00000518179 286 ntBASIC2.1□□□□□ -2.07
COL12A1Q99715 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.1□□□□□ -2.07
COL12A1Q99715 AK6P1-201ENST00000540219 478 ntBASIC2.1□□□□□ -2.07
COL12A1Q99715 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.1□□□□□ -2.07
COL12A1Q99715 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC2.1□□□□□ -2.07
COL12A1Q99715 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.1□□□□□ -2.07
COL12A1Q99715 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC2.1□□□□□ -2.07
COL12A1Q99715 CR769767.1-201ENST00000436337 346 ntBASIC2.1□□□□□ -2.07
COL12A1Q99715 RPL5P13-201ENST00000462840 709 ntBASIC2.1□□□□□ -2.07
COL12A1Q99715 AC016687.1-201ENST00000482574 353 ntBASIC2.1□□□□□ -2.07
COL12A1Q99715 AC021146.1-201ENST00000511202 716 ntBASIC2.1□□□□□ -2.07
COL12A1Q99715 AC025881.1-201ENST00000518851 512 ntBASIC2.1□□□□□ -2.07
COL12A1Q99715 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL12A1Q99715 AL162233.1-201ENST00000620014 944 ntBASIC2.1□□□□□ -2.07
COL12A1Q99715 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL12A1Q99715 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.09□□□□□ -2.07
COL12A1Q99715 RNY1P14-201ENST00000384426 108 ntBASIC2.09□□□□□ -2.07
COL12A1Q99715 Z98941.1-201ENST00000407764 100 ntBASIC2.09□□□□□ -2.07
COL12A1Q99715 AC135721.1-201ENST00000497954 479 ntBASIC2.09□□□□□ -2.07
COL12A1Q99715 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.09□□□□□ -2.07
COL12A1Q99715 NPM1P35-201ENST00000533043 868 ntBASIC2.09□□□□□ -2.07
COL12A1Q99715 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.09□□□□□ -2.07
COL12A1Q99715 APOOP1-201ENST00000604695 592 ntBASIC2.09□□□□□ -2.07
COL12A1Q99715 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
COL12A1Q99715 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
COL12A1Q99715 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
COL12A1Q99715 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
COL12A1Q99715 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
COL12A1Q99715 OR52B1P-201ENST00000316506 909 ntBASIC2.09□□□□□ -2.07
COL12A1Q99715 RPL31P12-201ENST00000422587 358 ntBASIC2.09□□□□□ -2.07
COL12A1Q99715 VDAC1P3-201ENST00000434069 851 ntBASIC2.09□□□□□ -2.07
COL12A1Q99715 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.09□□□□□ -2.07
COL12A1Q99715 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.08
COL12A1Q99715 RPL21P3-201ENST00000395517 478 ntBASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms