Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC005332.6-201ENST00000613178 446 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 C2orf27A-204ENST00000623058 969 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 ASNSP1-201ENST00000518311 1939 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 MFSD8-216ENST00000641147 4009 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC000123.3-201ENST00000624029 4975 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AL445487.1-201ENST00000415694 1580 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 MTCO1P14-201ENST00000441695 1559 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC015813.6-201ENST00000624409 5808 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 Y_RNA.144-201ENST00000363521 113 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 MT-TP-201ENST00000387461 68 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AP000357.1-201ENST00000409926 1165 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 OR9R1P-201ENST00000412200 877 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 MTND3P17-201ENST00000416968 344 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 CKS1BP6-201ENST00000424932 240 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC010307.1-201ENST00000467206 836 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 RPL12P20-201ENST00000475538 479 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC020890.1-201ENST00000491837 504 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC008897.1-201ENST00000494006 347 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC098799.3-201ENST00000506095 438 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC108064.1-201ENST00000513791 460 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AP000790.1-201ENST00000528891 737 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 OR5M2P-201ENST00000529003 936 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 BNIP3P23-201ENST00000599655 511 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 NRBF2P5-201ENST00000603087 788 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AL133338.2-201ENST00000604292 736 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC108479.2-201ENST00000617314 601 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AL732618.1-201ENST00000623251 301 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC116563.2-201ENST00000624751 535 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 U3.53-201ENST00000628922 216 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 MKKS-204ENST00000639674 192 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 AC100871.1-201ENST00000507871 1456 ntBASIC4.88□□□□□ -1.63
CDK5RAP1Q96SZ6 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AP000756.2-201ENST00000624168 2567 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU6-451P-201ENST00000362921 107 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU6-619P-201ENST00000365146 108 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU6-282P-201ENST00000365357 103 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU6-359P-201ENST00000365466 108 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AC068050.1-201ENST00000394891 380 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 SDCBPP2-201ENST00000424643 885 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RPL7P29-201ENST00000437151 728 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms