Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CITED4Q96RK1 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.29□□□□□ -1.56
CITED4Q96RK1 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.29□□□□□ -1.56
CITED4Q96RK1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.29□□□□□ -1.56
CITED4Q96RK1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.29□□□□□ -1.56
CITED4Q96RK1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.29□□□□□ -1.56
CITED4Q96RK1 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.29□□□□□ -1.56
CITED4Q96RK1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
CITED4Q96RK1 MIR5692A1-201ENST00000580523 69 ntBASIC5.29□□□□□ -1.56
CITED4Q96RK1 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.29□□□□□ -1.56
CITED4Q96RK1 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.29□□□□□ -1.56
CITED4Q96RK1 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.29□□□□□ -1.56
CITED4Q96RK1 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC5.29□□□□□ -1.56
CITED4Q96RK1 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.29□□□□□ -1.56
CITED4Q96RK1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.29□□□□□ -1.56
CITED4Q96RK1 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.29□□□□□ -1.56
CITED4Q96RK1 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CITED4Q96RK1 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CITED4Q96RK1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CITED4Q96RK1 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CITED4Q96RK1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CITED4Q96RK1 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 RNU5A-1-201ENST00000362698 116 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 SNORD3E-201ENST00000362899 217 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 Y_RNA.112-201ENST00000363250 102 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 RNU6-890P-201ENST00000384121 107 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 MIR124-3-201ENST00000384866 87 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 MIR1266-201ENST00000408125 84 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 RNA5SP431-201ENST00000410312 120 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 AC015977.1-201ENST00000418887 292 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 CYCSP52-201ENST00000422857 310 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 RPL26P6-201ENST00000440913 438 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 MED28P3-201ENST00000444288 531 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 AL035666.1-201ENST00000446195 348 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 AC026801.1-201ENST00000497178 464 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 AL031846.1-201ENST00000560933 314 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 MTCO3P23-201ENST00000561363 289 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 BNIP3P16-201ENST00000589779 534 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 AC002044.1-201ENST00000606707 158 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 MIR6885-201ENST00000612241 66 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 AC011890.2-201ENST00000613393 294 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 AC015967.1-201ENST00000619893 476 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 AC087894.3-201ENST00000623682 349 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 AL139811.1-201ENST00000424779 2299 ntBASIC5.28□□□□□ -1.56
CITED4Q96RK1 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CITED4Q96RK1 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CITED4Q96RK1 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CITED4Q96RK1 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.27□□□□□ -1.57
CITED4Q96RK1 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CITED4Q96RK1 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.27□□□□□ -1.57
CITED4Q96RK1 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CITED4Q96RK1 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CITED4Q96RK1 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
CITED4Q96RK1 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CITED4Q96RK1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CITED4Q96RK1 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CITED4Q96RK1 AC138393.1-203ENST00000327086 343 ntBASIC5.27□□□□□ -1.57
CITED4Q96RK1 RNU6-173P-201ENST00000364215 104 ntBASIC5.27□□□□□ -1.57
CITED4Q96RK1 RNU6-1303P-201ENST00000364841 107 ntBASIC5.27□□□□□ -1.57
CITED4Q96RK1 RNA5SP235-201ENST00000365411 114 ntBASIC5.27□□□□□ -1.57
CITED4Q96RK1 RN7SKP187-201ENST00000365536 330 ntBASIC5.27□□□□□ -1.57
CITED4Q96RK1 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CITED4Q96RK1 RNU6-306P-201ENST00000384617 107 ntBASIC5.27□□□□□ -1.57
CITED4Q96RK1 MIR152-201ENST00000385212 87 ntBASIC5.27□□□□□ -1.57
CITED4Q96RK1 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CITED4Q96RK1 RN7SKP268-201ENST00000411107 316 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms