Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.78□□□□□ -1.8
VMP1Q96GC9 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.78□□□□□ -1.8
VMP1Q96GC9 MIR4637-201ENST00000582405 84 ntBASIC3.78□□□□□ -1.8
VMP1Q96GC9 VN1R85P-201ENST00000601587 426 ntBASIC3.78□□□□□ -1.8
VMP1Q96GC9 AC114878.2-201ENST00000604863 1251 ntBASIC3.78□□□□□ -1.8
VMP1Q96GC9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.78□□□□□ -1.8
VMP1Q96GC9 AC120349.2-201ENST00000625002 298 ntBASIC3.78□□□□□ -1.8
VMP1Q96GC9 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.78□□□□□ -1.8
VMP1Q96GC9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.78□□□□□ -1.8
VMP1Q96GC9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
VMP1Q96GC9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VMP1Q96GC9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.78□□□□□ -1.8
VMP1Q96GC9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VMP1Q96GC9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VMP1Q96GC9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.78□□□□□ -1.81
VMP1Q96GC9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
VMP1Q96GC9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VMP1Q96GC9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VMP1Q96GC9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VMP1Q96GC9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC007496.3-201ENST00000624987 3443 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 MIR372-201ENST00000362225 67 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 RNA5SP515-201ENST00000364570 118 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 AL450338.1-201ENST00000407987 512 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 OR4K6P-201ENST00000416478 897 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 MRPS36P1-201ENST00000421291 307 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VMP1Q96GC9 RPL21P40-201ENST00000428586 483 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 EZH2P1-201ENST00000431167 291 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 MTND2P5-201ENST00000432656 1006 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 GOT2P5-201ENST00000433995 546 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 RPL21P89-201ENST00000444021 467 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 OR6K5P-201ENST00000447050 945 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 AP001992.1-205ENST00000462248 379 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC093853.1-201ENST00000515689 483 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 RNU6-711P-201ENST00000517255 106 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 UBE2NP1-201ENST00000545592 458 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 AP005205.1-201ENST00000563503 508 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VMP1Q96GC9 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AL606490.9-201ENST00000603331 271 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC012443.1-201ENST00000605605 231 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC024060.1-201ENST00000607052 494 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC080013.4-201ENST00000607624 649 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC024941.1-201ENST00000612250 334 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC006111.3-201ENST00000622137 383 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AL773545.4-201ENST00000637262 310 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 AL513478.4-201ENST00000641636 310 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 CDR1-202ENST00000625883 1485 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.77□□□□□ -1.81
VMP1Q96GC9 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VMP1Q96GC9 IPO8P1-201ENST00000455509 3109 ntBASIC3.77□□□□□ -1.81
VMP1Q96GC9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
VMP1Q96GC9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VMP1Q96GC9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VMP1Q96GC9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VMP1Q96GC9 AL513185.3-201ENST00000433335 1300 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VMP1Q96GC9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VMP1Q96GC9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
VMP1Q96GC9 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VMP1Q96GC9 RNU5D-1-201ENST00000363299 116 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 snoZ40.1-201ENST00000364540 72 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 RNA5SP283-201ENST00000365604 119 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 U3.42-201ENST00000408746 214 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 RNU4-6P-201ENST00000410804 122 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 AL161449.1-201ENST00000414531 1199 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VMP1Q96GC9 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 GTF2IP23-201ENST00000423746 351 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 GTF2IP3-201ENST00000433887 494 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 AL121871.1-201ENST00000443413 436 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms