Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AC013262.1-201ENST00000426710 252 ntBASIC3.16□□□□□ -1.9
UBE2E3Q969T4 MTCYBP32-201ENST00000427945 1084 ntBASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AC127537.2-201ENST00000439258 465 ntBASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 GAPDHP39-201ENST00000481866 979 ntBASIC3.16□□□□□ -1.9
UBE2E3Q969T4 RPL21P13-201ENST00000488305 481 ntBASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AC084024.2-201ENST00000503480 791 ntBASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AC093801.2-201ENST00000503966 1050 ntBASIC3.16□□□□□ -1.9
UBE2E3Q969T4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AC005476.1-201ENST00000554427 397 ntBASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AC023825.1-201ENST00000566704 1030 ntBASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 MIR4644-201ENST00000579929 84 ntBASIC3.16□□□□□ -1.9
UBE2E3Q969T4 MIR4666A-201ENST00000580160 79 ntBASIC3.16□□□□□ -1.9
UBE2E3Q969T4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AC090425.2-201ENST00000608818 501 ntBASIC3.16□□□□□ -1.9
UBE2E3Q969T4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 AL512506.2-201ENST00000624472 458 ntBASIC3.16□□□□□ -1.9
UBE2E3Q969T4 MTND2P41-201ENST00000637599 773 ntBASIC3.16□□□□□ -1.9
UBE2E3Q969T4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBE2E3Q969T4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.15□□□□□ -1.9
UBE2E3Q969T4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
UBE2E3Q969T4 AC111188.2-201ENST00000529697 1387 ntBASIC3.15□□□□□ -1.9
UBE2E3Q969T4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 RNU6-839P-201ENST00000363347 108 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 RNU1-33P-201ENST00000364249 162 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 U3.11-201ENST00000364476 212 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 OR6K3-202ENST00000368146 996 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AL133264.1-201ENST00000407157 562 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 HSFY4P-201ENST00000415994 1181 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 HMGB1P12-201ENST00000438594 598 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AL662791.1-201ENST00000441992 928 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 NPM1P13-201ENST00000452663 865 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 RPS24P6-201ENST00000452670 400 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 RPL23AP62-201ENST00000463396 453 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 RPL21P10-201ENST00000463521 490 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC010285.1-201ENST00000470580 392 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 RN7SL293P-201ENST00000481765 281 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC016550.1-201ENST00000505348 785 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC110794.1-201ENST00000505816 425 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 SNORA64.4-201ENST00000516632 81 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 SNORA67.7-201ENST00000516664 135 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 snoZ278.1-201ENST00000517059 112 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 SNORA31.20-201ENST00000517111 133 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC087894.1-201ENST00000538359 518 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 NCAPGP2-201ENST00000557911 754 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC008739.3-201ENST00000603262 127 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC011468.4-201ENST00000603942 409 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AP003973.1-201ENST00000604639 691 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC245389.1-201ENST00000605141 529 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AP005137.2-201ENST00000609238 400 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC006133.1-201ENST00000617106 264 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 AC006963.1-201ENST00000624003 1052 ntBASIC3.15□□□□□ -1.91
UBE2E3Q969T4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
UBE2E3Q969T4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.14□□□□□ -1.91
UBE2E3Q969T4 DBF4P1-201ENST00000412976 1892 ntBASIC3.14□□□□□ -1.91
UBE2E3Q969T4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms