Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01560Q8TB33 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01560Q8TB33 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
LINC01560Q8TB33 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01560Q8TB33 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01560Q8TB33 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01560Q8TB33 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
LINC01560Q8TB33 RPS4XP5-202ENST00000449995 1334 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 SNORD67-201ENST00000390833 111 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 EEF1A1P41-201ENST00000414667 207 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 RPL7P53-201ENST00000421245 739 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC009237.2-201ENST00000421358 284 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 USP9YP36-201ENST00000424581 829 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 USP9YP31-201ENST00000431405 881 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 USP9YP7-201ENST00000436723 430 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 SETP5-201ENST00000437270 562 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC108734.1-201ENST00000439549 399 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC016696.1-201ENST00000446949 318 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 MRPS31P2-201ENST00000451581 518 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 USP9YP32-201ENST00000452432 430 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 NAP1L1P3-201ENST00000462291 880 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 RPS4XP22-201ENST00000480755 780 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC012170.1-201ENST00000495139 359 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 TMEM248P1-201ENST00000510579 951 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 OR8L1P-201ENST00000534005 955 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 MTCYBP28-201ENST00000566728 1132 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC016542.1-201ENST00000608259 493 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 U7.8-201ENST00000619968 63 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC091903.1-201ENST00000624322 454 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 AC244205.2-202ENST00000635781 342 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 BX649567.1-201ENST00000642071 1134 ntBASIC2.71□□□□□ -1.98
LINC01560Q8TB33 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LINC01560Q8TB33 EXOC5P1-201ENST00000510543 1969 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 MTND5P28-201ENST00000438005 1594 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 MTCO1P14-201ENST00000441695 1559 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC011978.2-201ENST00000569835 2054 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 MIR22-201ENST00000362190 85 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 RN7SKP220-201ENST00000410611 288 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC092638.1-201ENST00000411966 1275 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 OR51A3P-201ENST00000413596 924 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 TAF13P2-201ENST00000416876 286 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 RPL23AP33-201ENST00000442301 452 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 HMGN1P5-201ENST00000448591 263 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 RPL29P29-201ENST00000448725 423 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC093755.1-201ENST00000512950 1023 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC112198.4-201ENST00000515450 351 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 RNU6-488P-201ENST00000515918 99 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 RNU4-60P-201ENST00000517239 135 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC027309.2-201ENST00000520566 192 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 HMGB1P1-201ENST00000522557 636 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC006518.2-201ENST00000542513 940 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 TGIF1P1-201ENST00000558095 802 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC027807.1-201ENST00000559921 996 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC009948.4-201ENST00000604692 675 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms