Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 AL355379.1-201ENST00000405542 640 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 AL031121.1-201ENST00000406553 254 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 AC236972.1-201ENST00000433225 199 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 MRPS33P4-201ENST00000434892 317 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 HMGB1P45-201ENST00000435986 653 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 RPL7P29-201ENST00000437151 728 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 RPL36AP33-201ENST00000450395 310 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 snoU13.7-201ENST00000459220 104 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 AC117440.1-201ENST00000474107 571 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 RPS29P26-201ENST00000477483 171 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 NCOR1P1-202ENST00000486162 291 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 AC026801.2-201ENST00000515352 425 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 AC008562.1-201ENST00000521763 330 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 AC004923.2-201ENST00000529649 369 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 AC074029.1-201ENST00000552531 1044 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 AC092184.1-201ENST00000625042 715 ntBASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CLDND2Q8NHS1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 MIR1303-201ENST00000408625 86 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 SNORD88.1-201ENST00000408684 91 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 MTND2P16-201ENST00000419987 799 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AL139281.1-201ENST00000422120 335 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AL139132.1-201ENST00000431587 344 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 COX6CP2-201ENST00000444980 225 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 HMGB1P48-201ENST00000446155 598 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AL590399.6-201ENST00000446396 307 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 GSTA11P-201ENST00000452866 669 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 PTGES3P5-201ENST00000455109 434 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 UBE2DNL-203ENST00000474922 222 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 MTND3P6-201ENST00000485242 339 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 PRELID3BP6-201ENST00000503839 571 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 TMEM248P1-201ENST00000510579 951 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 HMGB1P46-201ENST00000520062 610 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AC024224.1-201ENST00000538284 609 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AC083760.1-201ENST00000589621 670 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AC245128.3-201ENST00000594721 748 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AL359535.1-201ENST00000612100 1087 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 AL590240.3-201ENST00000621416 943 ntBASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CLDND2Q8NHS1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 AL355578.1-201ENST00000607405 1328 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 AC073325.2-201ENST00000339545 159 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 RNA5SP295-201ENST00000362655 121 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 U8.9-201ENST00000365667 134 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 MIR142-201ENST00000384835 87 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 MIR591-201ENST00000385290 95 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 BTBD10P2-201ENST00000404779 676 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 AP000567.1-201ENST00000406413 156 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 XKRYP4-201ENST00000414395 483 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 MTCO1P57-201ENST00000432182 261 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 XKRYP5-201ENST00000449659 483 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 RPS4XP13-201ENST00000483219 789 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 AC083906.5-201ENST00000503722 328 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 AC069306.1-201ENST00000507006 843 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 SCGB1D5P-201ENST00000515134 247 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 RN7SKP283-201ENST00000517197 270 ntBASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDND2Q8NHS1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms