Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ST13P14-201ENST00000474095 734 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 RPL23AP45-201ENST00000476406 468 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 LTV1P1-201ENST00000510683 1237 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 RPL23AP84-201ENST00000571193 464 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 AC141257.3-201ENST00000572906 215 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 AL359821.1-201ENST00000605519 182 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 AC079298.2-201ENST00000623885 459 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 AC107081.3-201ENST00000612715 2034 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 TTC39DP-201ENST00000416781 1688 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 RNU4-44P-201ENST00000363050 141 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 RNA5SP88-201ENST00000365560 109 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 CYCSP49-201ENST00000420810 319 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 AC007677.1-201ENST00000445757 515 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 AL354710.1-201ENST00000453641 246 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 AL121877.1-201ENST00000453704 622 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 AL024509.2-201ENST00000493462 493 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 AC108078.3-201ENST00000502633 489 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 AC100870.1-201ENST00000522035 505 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 AC128657.1-201ENST00000549459 145 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 AC010198.2-201ENST00000550612 259 ntBASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC168Q8NDH2 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 ERHP2-201ENST00000402323 299 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 AL121834.1-202ENST00000404494 277 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 AC245291.1-201ENST00000419501 328 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 AP001086.1-201ENST00000494882 321 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 AC106872.3-201ENST00000495104 446 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 NARSP2-201ENST00000518524 679 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 snoU13.31-201ENST00000607291 104 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 AC009318.2-201ENST00000610917 651 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 RMST_9.1-201ENST00000619945 193 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 LINC00216-201ENST00000623548 1126 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 HMGB1P10-201ENST00000395823 563 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 ST13P20-201ENST00000447996 1065 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 CKS1BP7-201ENST00000522230 235 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 SUB1P3-201ENST00000564581 315 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 MIR4635-201ENST00000583759 79 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 AC244517.3-201ENST00000616254 1235 ntBASIC2.07□□□□□ -2.08
CCDC168Q8NDH2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AL139276.1-201ENST00000311910 1001 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 RNU1-17P-201ENST00000363022 152 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 EIF5P1-201ENST00000400019 1231 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AL024474.1-201ENST00000404655 591 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 FAR1P1-201ENST00000427163 934 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AL592437.1-201ENST00000443781 492 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AC117522.2-201ENST00000510049 657 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 SNORA64.4-201ENST00000516632 81 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AL451049.1-201ENST00000608672 497 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AC010338.1-201ENST00000621823 717 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 RNY1-201ENST00000364228 113 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 RNA5SP296-201ENST00000410523 111 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 RNA5SP38-201ENST00000410750 119 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 USP9YP20-201ENST00000419224 558 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AC104389.3-201ENST00000445629 235 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AC026436.1-201ENST00000510537 270 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AC104027.1-201ENST00000521887 300 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AC018630.1-201ENST00000541376 925 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 AC093673.2-201ENST00000609674 331 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.06□□□□□ -2.08
CCDC168Q8NDH2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms