Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 AC006206.1-201ENST00000544842 3387 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 Y_RNA.496-201ENST00000384444 101 ntBASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 Y_RNA.512-201ENST00000384518 102 ntBASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 MIR223-201ENST00000385204 110 ntBASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 RPL11P3-201ENST00000395256 523 ntBASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 RPL36P19-201ENST00000430744 301 ntBASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 RAC1P7-201ENST00000445367 377 ntBASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 AC083899.1-201ENST00000454465 3819 ntBASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 AC016559.2-201ENST00000510759 359 ntBASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 RNU6-408P-201ENST00000515910 100 ntBASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 HMGN2P6-201ENST00000551091 273 ntBASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 AL355297.3-201ENST00000604082 446 ntBASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 AC103705.1-201ENST00000619013 241 ntBASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 MTCO1P24-201ENST00000515438 1558 ntBASIC6.48□□□□□ -1.37
SH3RF1Q7Z6J0 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 AP004607.3-201ENST00000530354 3915 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 RNA5SP234-201ENST00000363916 119 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 SNORD115-7-201ENST00000365306 82 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 Y_RNA.396-201ENST00000383949 103 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 Y_RNA.424-201ENST00000384063 103 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 RNU11-201ENST00000387069 134 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 MIR550A3-201ENST00000390735 95 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 AL133270.1-201ENST00000402635 279 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 RNU6-1050P-201ENST00000410388 107 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 BX276092.6-201ENST00000430476 250 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 AC099670.2-201ENST00000435130 321 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 RPL21P89-201ENST00000444021 467 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 BX276092.8-201ENST00000455722 250 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 HMGB3P30-201ENST00000457863 606 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 AC108161.1-201ENST00000461060 402 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 PLGLA-201ENST00000465668 449 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 AC139365.2-201ENST00000517972 253 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 AC096996.1-201ENST00000563813 325 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 RN7SL708P-201ENST00000580952 299 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 AL360012.1-201ENST00000602813 131 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 AC141273.2-201ENST00000618989 130 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 MIR6837-201ENST00000620884 64 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 SAMMSON-210ENST00000641260 1308 ntBASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SH3RF1Q7Z6J0 AC114774.1-201ENST00000507410 1770 ntBASIC6.46□□□□□ -1.37
SH3RF1Q7Z6J0 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
SH3RF1Q7Z6J0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.46□□□□□ -1.37
SH3RF1Q7Z6J0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
SH3RF1Q7Z6J0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.46□□□□□ -1.37
SH3RF1Q7Z6J0 AL138713.1-201ENST00000624026 2130 ntBASIC6.46□□□□□ -1.37
SH3RF1Q7Z6J0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 RNU6-511P-201ENST00000363496 107 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 RNU6-450P-201ENST00000364654 107 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 Y_RNA.380-201ENST00000365663 111 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 Y_RNA.515-201ENST00000384535 112 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 MIR137-201ENST00000385223 102 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 RNA5SP219-201ENST00000390940 113 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 HMGB3P7-201ENST00000400214 611 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms