Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC125257.1-201ENST00000560400 2930 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.88□□□□□ -1.79
USP43Q70EL4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USP43Q70EL4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP43Q70EL4 SEC63P2-201ENST00000503863 1939 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP43Q70EL4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
USP43Q70EL4 ENSAP3-201ENST00000312710 333 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.88□□□□□ -1.79
USP43Q70EL4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP43Q70EL4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
USP43Q70EL4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.88□□□□□ -1.79
USP43Q70EL4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
USP43Q70EL4 RPS27AP11-201ENST00000402798 447 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 VTA1P1-201ENST00000414044 866 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC009237.5-201ENST00000414271 501 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC138393.2-201ENST00000414742 246 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 TCEA1P4-201ENST00000415066 844 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AL161631.1-201ENST00000417933 486 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AL159169.1-201ENST00000421119 127 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 Z99497.1-201ENST00000421282 135 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 MRPS36P1-201ENST00000421291 307 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 CHIAP3-201ENST00000423668 1133 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AL022400.1-201ENST00000423946 935 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.88□□□□□ -1.79
USP43Q70EL4 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 USP9YP18-201ENST00000425912 695 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.88□□□□□ -1.79
USP43Q70EL4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.88□□□□□ -1.79
USP43Q70EL4 CACYBPP1-201ENST00000438592 684 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 DNAJC19P4-201ENST00000440115 345 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.88□□□□□ -1.79
USP43Q70EL4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.88□□□□□ -1.79
USP43Q70EL4 COX6CP2-201ENST00000444980 225 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC079776.3-201ENST00000450665 370 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC010733.1-201ENST00000451515 401 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 CEACAMP6-201ENST00000452007 574 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 PPIAP15-201ENST00000479662 484 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.88□□□□□ -1.79
USP43Q70EL4 FAM92A1P2-202ENST00000504766 877 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 ARL4AP2-201ENST00000507378 601 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC079395.1-201ENST00000510981 262 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC010587.2-201ENST00000511727 448 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 SNORA70.14-201ENST00000516205 110 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 RN7SKP244-201ENST00000516513 307 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 RNU6-678P-201ENST00000516832 109 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 RNA5SP143-201ENST00000516936 115 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.88□□□□□ -1.79
USP43Q70EL4 AC023632.1-201ENST00000518463 375 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.88□□□□□ -1.79
USP43Q70EL4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.88□□□□□ -1.79
USP43Q70EL4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USP43Q70EL4 OR5AL2P-201ENST00000532185 920 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC092747.2-201ENST00000545069 983 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.88□□□□□ -1.79
USP43Q70EL4 AC007954.1-201ENST00000554198 494 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC044913.1-201ENST00000557200 430 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.88□□□□□ -1.79
USP43Q70EL4 AC091805.2-201ENST00000603848 235 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC093838.1-201ENST00000613014 469 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC104260.1-201ENST00000616660 539 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 U4.5-201ENST00000617137 123 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC006338.1-201ENST00000618453 749 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AL607023.1-201ENST00000620045 248 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 AC068831.8-201ENST00000620171 435 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 PCMTD1P7-201ENST00000634506 357 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.88□□□□□ -1.79
USP43Q70EL4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.88□□□□□ -1.79
USP43Q70EL4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP43Q70EL4 AL118496.1-201ENST00000440201 1812 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP43Q70EL4 AC139713.2-214ENST00000642059 1811 ntBASIC3.88□□□□□ -1.79
USP43Q70EL4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
USP43Q70EL4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USP43Q70EL4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.88□□□□□ -1.79
USP43Q70EL4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.88□□□□□ -1.79
USP43Q70EL4 EXOC5P1-201ENST00000510543 1969 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AC066616.2-201ENST00000559334 1481 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.87□□□□□ -1.79
USP43Q70EL4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USP43Q70EL4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
USP43Q70EL4 IGKV7-3-201ENST00000357453 298 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 RNA5SP447-201ENST00000363749 119 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP43Q70EL4 RNU4-31P-201ENST00000384211 141 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 RNU6-532P-201ENST00000384318 107 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 SNORD66.1-201ENST00000391230 76 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 SDHCP2-201ENST00000398565 501 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USP43Q70EL4 FGF7P8-201ENST00000402994 292 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AL590002.1-201ENST00000406554 418 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AP000357.1-201ENST00000409926 1165 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 RNA5SP80-201ENST00000410475 111 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 RNU6-575P-201ENST00000411326 105 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 RPL7P8-201ENST00000411964 730 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 RPS20P14-201ENST00000412545 360 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AC140479.3-201ENST00000418944 1126 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.87□□□□□ -1.79
USP43Q70EL4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms