Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 B3GALNT1P1-201ENST00000420569 975 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 MTCYBP14-201ENST00000457471 715 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 AC068587.2-201ENST00000478386 781 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 RN7SKP24-201ENST00000515888 284 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 RNU6-548P-201ENST00000517083 115 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 CKS1BP1-201ENST00000555221 240 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 VN1R9P-201ENST00000614184 867 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 AC008432.1-201ENST00000615912 1320 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 RNA5SP425-201ENST00000410336 112 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 AC068305.1-201ENST00000497406 726 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 AC026523.2-201ENST00000625039 7739 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 RN7SKP140-201ENST00000411196 284 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 RPS15AP28-201ENST00000435088 386 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 COX6CP2-201ENST00000444980 225 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 AP001086.1-201ENST00000494882 321 ntBASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
VPS13DQ5THJ4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 RNU1-75P-201ENST00000347264 129 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 RNU6-618P-201ENST00000363518 112 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AL590290.1-201ENST00000405336 380 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AL592045.1-201ENST00000429867 352 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 EXTL2P1-201ENST00000446218 416 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AL354710.1-201ENST00000453641 246 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AC015712.3-201ENST00000559380 164 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 SNORD62.1-201ENST00000362541 86 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 RNU2-22P-201ENST00000411266 212 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AC080125.1-201ENST00000414888 684 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 RPL30P9-201ENST00000465586 330 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AC096725.1-201ENST00000514266 313 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AC078814.3-201ENST00000553036 491 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 YWHAEP7-203ENST00000622054 312 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 EXOC5P1-201ENST00000510543 1969 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AC147055.1-201ENST00000509261 750 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 CKS1BP7-201ENST00000522230 235 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AC123904.3-201ENST00000547218 814 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.62□□□□□ -2.15
VPS13DQ5THJ4 Y_RNA.40-201ENST00000362645 93 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AC125238.1-201ENST00000448842 249 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AL049830.2-201ENST00000480072 201 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 GOLGA5P1-201ENST00000507317 980 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 RN7SKP43-201ENST00000516173 320 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 MIR8070-201ENST00000616510 88 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 OR4G2P-202ENST00000641004 1759 ntBASIC1.61□□□□□ -2.15
VPS13DQ5THJ4 MTND5P28-201ENST00000438005 1594 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms