Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 RPS3AP52-201ENST00000435639 297 ntBASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AL133244.1-201ENST00000456007 258 ntBASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AC022133.1-201ENST00000490961 571 ntBASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AC021146.1-201ENST00000511202 716 ntBASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 RNU6-864P-201ENST00000516256 108 ntBASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 RNA5SP43-201ENST00000516559 110 ntBASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AC011979.2-201ENST00000527568 352 ntBASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 VN1R107P-201ENST00000601784 209 ntBASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 HSPE1P14-201ENST00000605812 302 ntBASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AC011373.1-201ENST00000607270 237 ntBASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 SNX18P1Y-201ENST00000616231 511 ntBASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 AL138721.1-201ENST00000616756 179 ntBASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 CYP3A51P-201ENST00000633513 256 ntBASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.9□□□□□ -1.46
COL13A1Q5TAT6 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL13A1Q5TAT6 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL13A1Q5TAT6 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
COL13A1Q5TAT6 AL079305.1-201ENST00000623159 3008 ntBASIC5.9□□□□□ -1.47
COL13A1Q5TAT6 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL13A1Q5TAT6 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL13A1Q5TAT6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
COL13A1Q5TAT6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
COL13A1Q5TAT6 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL13A1Q5TAT6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.9□□□□□ -1.47
COL13A1Q5TAT6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
COL13A1Q5TAT6 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
COL13A1Q5TAT6 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AC067945.1-201ENST00000342609 618 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 Y_RNA.28-201ENST00000362554 111 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 RNU4-66P-201ENST00000365199 138 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 Y_RNA.339-201ENST00000365325 102 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 RNU6-38P-201ENST00000384085 107 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 RN7SKP235-201ENST00000410662 305 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AC093578.1-201ENST00000415219 368 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 BX510359.2-201ENST00000417920 305 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AC107399.1-201ENST00000451226 265 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 RNU6-333P-201ENST00000459117 107 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AC126389.1-201ENST00000477436 290 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AC018797.3-201ENST00000513388 1241 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 SUMO2P20-201ENST00000520803 283 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AC063950.1-201ENST00000552036 308 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 HNRNPCP4-201ENST00000571636 900 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AP001029.3-201ENST00000588063 596 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 CTHRC1P1-201ENST00000605383 469 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 AC114781.5-201ENST00000615297 108 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 BX005214.3-202ENST00000619809 325 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL13A1Q5TAT6 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms