Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.28□□□□□ -1.56
CCNFP41002 AC000068.2-201ENST00000608816 460 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AL031666.3-201ENST00000609320 1006 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AC245517.5-201ENST00000611529 162 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AC109309.2-201ENST00000612597 332 ntBASIC5.28□□□□□ -1.56
CCNFP41002 BX005214.3-202ENST00000619809 325 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AL049767.1-202ENST00000637826 242 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AC074101.1-201ENST00000637861 241 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AL596275.2-204ENST00000641628 552 ntBASIC5.28□□□□□ -1.56
CCNFP41002 AL596275.2-206ENST00000641957 626 ntBASIC5.28□□□□□ -1.56
CCNFP41002 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNFP41002 DHX40P1-201ENST00000588725 1412 ntBASIC5.28□□□□□ -1.56
CCNFP41002 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCNFP41002 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNFP41002 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNFP41002 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNFP41002 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNFP41002 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNFP41002 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CCNFP41002 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNFP41002 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCNFP41002 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CCNFP41002 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCNFP41002 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CCNFP41002 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CCNFP41002 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CCNFP41002 SNORA51.2-201ENST00000364595 132 ntBASIC5.27□□□□□ -1.57
CCNFP41002 Y_RNA.367-201ENST00000365544 101 ntBASIC5.27□□□□□ -1.57
CCNFP41002 RNU6-606P-201ENST00000384721 111 ntBASIC5.27□□□□□ -1.57
CCNFP41002 RNU6-278P-201ENST00000390945 109 ntBASIC5.27□□□□□ -1.57
CCNFP41002 RNU2-62P-201ENST00000410868 191 ntBASIC5.27□□□□□ -1.57
CCNFP41002 RN7SKP247-201ENST00000411094 308 ntBASIC5.27□□□□□ -1.57
CCNFP41002 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.27□□□□□ -1.57
CCNFP41002 NDUFB4P5-201ENST00000415445 361 ntBASIC5.27□□□□□ -1.57
CCNFP41002 AC127526.1-201ENST00000417526 366 ntBASIC5.27□□□□□ -1.57
CCNFP41002 USP9YP20-201ENST00000419224 558 ntBASIC5.27□□□□□ -1.57
CCNFP41002 OR1AA1P-201ENST00000419597 916 ntBASIC5.27□□□□□ -1.57
CCNFP41002 CHEK2P5-201ENST00000423877 246 ntBASIC5.27□□□□□ -1.57
CCNFP41002 MTCO3P46-201ENST00000425787 232 ntBASIC5.27□□□□□ -1.57
CCNFP41002 IFNA20P-201ENST00000436840 528 ntBASIC5.27□□□□□ -1.57
CCNFP41002 GAPDHP58-201ENST00000438477 1006 ntBASIC5.27□□□□□ -1.57
CCNFP41002 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNFP41002 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.27□□□□□ -1.57
CCNFP41002 SPRYD7P1-201ENST00000443861 570 ntBASIC5.27□□□□□ -1.57
CCNFP41002 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.27□□□□□ -1.57
CCNFP41002 BX276092.4-201ENST00000452056 248 ntBASIC5.27□□□□□ -1.57
CCNFP41002 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.27□□□□□ -1.57
CCNFP41002 AL356010.1-201ENST00000456364 102 ntBASIC5.27□□□□□ -1.57
CCNFP41002 MRPS17P3-201ENST00000465453 385 ntBASIC5.27□□□□□ -1.57
CCNFP41002 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNFP41002 AC087385.1-201ENST00000475062 312 ntBASIC5.27□□□□□ -1.57
CCNFP41002 RN7SL547P-201ENST00000490793 290 ntBASIC5.27□□□□□ -1.57
CCNFP41002 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCNFP41002 RN7SL101P-201ENST00000496350 279 ntBASIC5.27□□□□□ -1.57
CCNFP41002 RPL38P4-201ENST00000502376 214 ntBASIC5.27□□□□□ -1.57
CCNFP41002 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNFP41002 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNFP41002 RN7SKP277-201ENST00000516895 283 ntBASIC5.27□□□□□ -1.57
CCNFP41002 HMGB1P40-201ENST00000525121 540 ntBASIC5.27□□□□□ -1.57
CCNFP41002 AP003072.1-201ENST00000531740 145 ntBASIC5.27□□□□□ -1.57
CCNFP41002 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNFP41002 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNFP41002 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.27□□□□□ -1.57
CCNFP41002 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.27□□□□□ -1.57
CCNFP41002 RN7SL708P-201ENST00000580952 299 ntBASIC5.27□□□□□ -1.57
CCNFP41002 AC105224.1-201ENST00000587055 421 ntBASIC5.27□□□□□ -1.57
CCNFP41002 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNFP41002 AL121992.2-201ENST00000606262 256 ntBASIC5.27□□□□□ -1.57
CCNFP41002 AC010424.2-201ENST00000607594 443 ntBASIC5.27□□□□□ -1.57
CCNFP41002 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.27□□□□□ -1.57
CCNFP41002 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CCNFP41002 AC079684.1-201ENST00000621405 437 ntBASIC5.27□□□□□ -1.57
CCNFP41002 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNFP41002 LARP1BP1-201ENST00000506036 1359 ntBASIC5.27□□□□□ -1.57
CCNFP41002 MTND4P35-201ENST00000604257 1375 ntBASIC5.27□□□□□ -1.57
CCNFP41002 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCNFP41002 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNFP41002 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CCNFP41002 AL672167.1-204ENST00000641875 3017 ntBASIC5.26□□□□□ -1.57
CCNFP41002 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCNFP41002 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNFP41002 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CCNFP41002 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNFP41002 THAP12P4-201ENST00000528321 2266 ntBASIC5.26□□□□□ -1.57
CCNFP41002 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNFP41002 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNFP41002 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CCNFP41002 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.26□□□□□ -1.57
CCNFP41002 AC008758.3-201ENST00000507003 1829 ntBASIC5.26□□□□□ -1.57
CCNFP41002 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCNFP41002 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNFP41002 AC067945.1-201ENST00000342609 618 ntBASIC5.26□□□□□ -1.57
CCNFP41002 FRG1CP-201ENST00000358464 769 ntBASIC5.26□□□□□ -1.57
CCNFP41002 SNORA51.1-201ENST00000363243 140 ntBASIC5.26□□□□□ -1.57
CCNFP41002 RNU4-48P-201ENST00000365559 182 ntBASIC5.26□□□□□ -1.57
CCNFP41002 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCNFP41002 RNU6-1227P-201ENST00000383981 107 ntBASIC5.26□□□□□ -1.57
CCNFP41002 RNU6-692P-201ENST00000384496 107 ntBASIC5.26□□□□□ -1.57
CCNFP41002 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNFP41002 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms