Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC021146.5-201ENST00000503544 545 ntBASIC3.23□□□□□ -1.89
RORAP35398 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RORAP35398 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.23□□□□□ -1.89
RORAP35398 AC112518.2-201ENST00000508565 425 ntBASIC3.23□□□□□ -1.89
RORAP35398 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.23□□□□□ -1.89
RORAP35398 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.23□□□□□ -1.89
RORAP35398 RNU6-488P-201ENST00000515918 99 ntBASIC3.23□□□□□ -1.89
RORAP35398 RN7SKP116-201ENST00000516902 319 ntBASIC3.23□□□□□ -1.89
RORAP35398 RNA5SP380-201ENST00000517190 98 ntBASIC3.23□□□□□ -1.89
RORAP35398 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.23□□□□□ -1.89
RORAP35398 IGJP1-201ENST00000522682 475 ntBASIC3.23□□□□□ -1.89
RORAP35398 AP001636.2-201ENST00000525517 696 ntBASIC3.23□□□□□ -1.89
RORAP35398 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.23□□□□□ -1.89
RORAP35398 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RORAP35398 AC006518.1-201ENST00000541449 943 ntBASIC3.23□□□□□ -1.89
RORAP35398 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.23□□□□□ -1.89
RORAP35398 AC023824.3-201ENST00000569003 562 ntBASIC3.23□□□□□ -1.89
RORAP35398 ZNF415P1-201ENST00000582279 1166 ntBASIC3.23□□□□□ -1.89
RORAP35398 AP001029.3-201ENST00000588063 596 ntBASIC3.23□□□□□ -1.89
RORAP35398 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.23□□□□□ -1.89
RORAP35398 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.23□□□□□ -1.89
RORAP35398 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.23□□□□□ -1.89
RORAP35398 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.23□□□□□ -1.89
RORAP35398 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.23□□□□□ -1.89
RORAP35398 AC022149.2-201ENST00000621061 203 ntBASIC3.23□□□□□ -1.89
RORAP35398 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.23□□□□□ -1.89
RORAP35398 AC127502.3-201ENST00000636170 1206 ntBASIC3.23□□□□□ -1.89
RORAP35398 AC032011.1-201ENST00000611703 1549 ntBASIC3.23□□□□□ -1.89
RORAP35398 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
RORAP35398 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.23□□□□□ -1.89
RORAP35398 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RORAP35398 AC073055.1-201ENST00000456901 1621 ntBASIC3.22□□□□□ -1.89
RORAP35398 AC007496.3-201ENST00000624987 3443 ntBASIC3.22□□□□□ -1.89
RORAP35398 AC110774.1-201ENST00000623567 2018 ntBASIC3.22□□□□□ -1.89
RORAP35398 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RORAP35398 U3.19-201ENST00000390893 196 ntBASIC3.22□□□□□ -1.89
RORAP35398 RPL22P22-201ENST00000395439 379 ntBASIC3.22□□□□□ -1.89
RORAP35398 SFR1P1-201ENST00000403720 688 ntBASIC3.22□□□□□ -1.89
RORAP35398 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.22□□□□□ -1.89
RORAP35398 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
RORAP35398 RNU4-65P-201ENST00000410473 140 ntBASIC3.22□□□□□ -1.89
RORAP35398 RNA5SP293-201ENST00000410527 113 ntBASIC3.22□□□□□ -1.89
RORAP35398 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.22□□□□□ -1.89
RORAP35398 AC008280.1-201ENST00000418851 412 ntBASIC3.22□□□□□ -1.89
RORAP35398 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.22□□□□□ -1.89
RORAP35398 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.22□□□□□ -1.89
RORAP35398 RPS7P2-201ENST00000435134 607 ntBASIC3.22□□□□□ -1.89
RORAP35398 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.22□□□□□ -1.89
RORAP35398 AL096803.2-201ENST00000450032 677 ntBASIC3.22□□□□□ -1.89
RORAP35398 NPM1P13-201ENST00000452663 865 ntBASIC3.22□□□□□ -1.89
RORAP35398 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RORAP35398 RPS15AP1-201ENST00000457423 391 ntBASIC3.22□□□□□ -1.89
RORAP35398 RPL21P8-201ENST00000465083 535 ntBASIC3.22□□□□□ -1.89
RORAP35398 RPL23AP67-201ENST00000465341 474 ntBASIC3.22□□□□□ -1.89
RORAP35398 AC010285.1-201ENST00000470580 392 ntBASIC3.22□□□□□ -1.89
RORAP35398 AC087879.1-201ENST00000474343 374 ntBASIC3.22□□□□□ -1.89
RORAP35398 ACTG1P13-201ENST00000486987 1043 ntBASIC3.22□□□□□ -1.89
RORAP35398 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.22□□□□□ -1.89
RORAP35398 RN7SKP57-201ENST00000517248 293 ntBASIC3.22□□□□□ -1.89
RORAP35398 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.22□□□□□ -1.89
RORAP35398 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.22□□□□□ -1.89
RORAP35398 TGIF1P1-201ENST00000558095 802 ntBASIC3.22□□□□□ -1.89
RORAP35398 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RORAP35398 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.22□□□□□ -1.89
RORAP35398 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.22□□□□□ -1.89
RORAP35398 AC133794.1-201ENST00000602731 914 ntBASIC3.22□□□□□ -1.89
RORAP35398 AC092474.3-201ENST00000603022 568 ntBASIC3.22□□□□□ -1.89
RORAP35398 AC026741.1-201ENST00000605892 482 ntBASIC3.22□□□□□ -1.89
RORAP35398 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.22□□□□□ -1.89
RORAP35398 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
RORAP35398 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RORAP35398 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.22□□□□□ -1.89
RORAP35398 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
RORAP35398 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.21□□□□□ -1.9
RORAP35398 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.21□□□□□ -1.9
RORAP35398 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.21□□□□□ -1.9
RORAP35398 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RORAP35398 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RORAP35398 RNU1-75P-201ENST00000347264 129 ntBASIC3.21□□□□□ -1.9
RORAP35398 Y_RNA.110-201ENST00000363220 99 ntBASIC3.21□□□□□ -1.9
RORAP35398 RNU6-525P-201ENST00000363685 104 ntBASIC3.21□□□□□ -1.9
RORAP35398 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RORAP35398 MT-TC-201ENST00000387405 66 ntBASIC3.21□□□□□ -1.9
RORAP35398 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.21□□□□□ -1.9
RORAP35398 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.21□□□□□ -1.9
RORAP35398 AL009174.1-201ENST00000426577 416 ntBASIC3.21□□□□□ -1.9
RORAP35398 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.21□□□□□ -1.9
RORAP35398 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.21□□□□□ -1.9
RORAP35398 AL158071.1-201ENST00000430315 461 ntBASIC3.21□□□□□ -1.9
RORAP35398 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.21□□□□□ -1.9
RORAP35398 AL158053.1-201ENST00000441503 453 ntBASIC3.21□□□□□ -1.9
RORAP35398 HSFY3P-201ENST00000444242 1191 ntBASIC3.21□□□□□ -1.9
RORAP35398 GXYLT1P1-201ENST00000446657 490 ntBASIC3.21□□□□□ -1.9
RORAP35398 AC125238.1-201ENST00000448842 249 ntBASIC3.21□□□□□ -1.9
RORAP35398 AC115115.1-201ENST00000449927 248 ntBASIC3.21□□□□□ -1.9
RORAP35398 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.21□□□□□ -1.9
RORAP35398 RPS4XP6-201ENST00000477670 797 ntBASIC3.21□□□□□ -1.9
RORAP35398 AC006483.1-201ENST00000487308 313 ntBASIC3.21□□□□□ -1.9
RORAP35398 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.21□□□□□ -1.9
RORAP35398 RNF138P1-201ENST00000502765 546 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms