Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 DUTP6-201ENST00000425573 462 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 RPL23AP58-201ENST00000440453 469 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DMAP28067 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DMAP28067 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DMAP28067 RPL23AP23-201ENST00000452590 471 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 AC020898.1-201ENST00000474167 787 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 RPS27AP9-201ENST00000477681 438 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DMAP28067 RPL9P33-201ENST00000484311 566 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DMAP28067 RNU6-826P-201ENST00000516827 104 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 MIR2116-201ENST00000517221 80 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.73□□□□□ -1.97
HLA-DMAP28067 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DMAP28067 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DMAP28067 OR4A45P-201ENST00000529954 901 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DMAP28067 AC006504.3-201ENST00000586818 523 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DMAP28067 AC245036.5-201ENST00000596330 847 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 AC096947.1-201ENST00000603233 470 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DMAP28067 AL355810.1-201ENST00000614629 552 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 ZYXP1-201ENST00000617638 118 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DMAP28067 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DMAP28067 AC139713.2-210ENST00000641741 992 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 AP003122.5-201ENST00000527668 3766 ntBASIC2.73□□□□□ -1.97
HLA-DMAP28067 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DMAP28067 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
HLA-DMAP28067 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DMAP28067 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
HLA-DMAP28067 Z83843.1-201ENST00000604070 3685 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DMAP28067 AC126755.2-208ENST00000327792 462 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 AC138969.1-213ENST00000331436 462 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DMAP28067 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DMAP28067 MTND4P13-201ENST00000402078 1023 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 RPL7P2-201ENST00000427639 268 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 C4BPAP2-201ENST00000428434 478 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 RPL21P110-201ENST00000433345 446 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 AL590762.3-201ENST00000436372 640 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 RPS29P6-201ENST00000438196 145 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 RNFT1P2-201ENST00000443064 757 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 RPS26P30-201ENST00000443431 335 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DMAP28067 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DMAP28067 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DMAP28067 AC073387.1-201ENST00000453261 709 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DMAP28067 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DMAP28067 AC098799.2-201ENST00000509466 868 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 RN7SKP18-201ENST00000516005 275 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 IGKV2-26-201ENST00000518305 343 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DMAP28067 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DMAP28067 OR8R1P-201ENST00000543943 764 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DMAP28067 AC087481.2-201ENST00000565492 330 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 AC005412.1-201ENST00000580812 1049 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DMAP28067 AL162713.1-201ENST00000604480 262 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 AC009570.1-201ENST00000609599 745 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 AL136295.6-201ENST00000610486 658 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 AL118556.2-201ENST00000614375 824 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 AL138880.2-201ENST00000616214 239 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 CUL1P1-201ENST00000509510 2425 ntBASIC2.72□□□□□ -1.97
HLA-DMAP28067 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DMAP28067 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DMAP28067 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 SNORA56-201ENST00000383966 129 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 RNU6-1226P-201ENST00000384317 107 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 SNORD17-201ENST00000390930 237 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 RN7SKP111-201ENST00000410349 271 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 HMGB3P31-201ENST00000413333 595 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 AL451074.5-201ENST00000415894 435 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 SSXP9-201ENST00000417503 292 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 PNRC2P1-201ENST00000423940 420 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 ATP5JP1-201ENST00000431631 322 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 OR5H5P-201ENST00000503164 928 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 SNORA31.8-201ENST00000516327 108 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 AC103843.2-201ENST00000530523 682 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 AADACP1-206ENST00000561502 1193 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms