Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LMNB1P20700 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LMNB1P20700 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LMNB1P20700 AL445437.1-201ENST00000623157 3087 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LMNB1P20700 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.89□□□□□ -1.47
LMNB1P20700 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LMNB1P20700 AC010329.2-201ENST00000595195 2737 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LMNB1P20700 AC002525.1-201ENST00000624392 1622 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LMNB1P20700 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LMNB1P20700 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LMNB1P20700 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LMNB1P20700 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LMNB1P20700 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LMNB1P20700 AL031595.2-201ENST00000624215 19071 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.88□□□□□ -1.47
LMNB1P20700 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.88□□□□□ -1.47
LMNB1P20700 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LMNB1P20700 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LMNB1P20700 RNU1-94P-201ENST00000362627 173 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 RNU6-1293P-201ENST00000384077 107 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 MT-TD-201ENST00000387419 68 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 RPL23AP32-201ENST00000395315 459 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 RPL31P1-201ENST00000398116 372 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 AL357515.1-201ENST00000402967 542 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 RNA5SP345-201ENST00000410646 108 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 COX6CP13-201ENST00000428703 226 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LMNB1P20700 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.88□□□□□ -1.47
LMNB1P20700 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.88□□□□□ -1.47
LMNB1P20700 AC005297.2-201ENST00000450430 606 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.88□□□□□ -1.47
LMNB1P20700 RPL7P19-201ENST00000469948 618 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.88□□□□□ -1.47
LMNB1P20700 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.88□□□□□ -1.47
LMNB1P20700 SNORA31.9-201ENST00000516429 84 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.88□□□□□ -1.47
LMNB1P20700 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.88□□□□□ -1.47
LMNB1P20700 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.88□□□□□ -1.47
LMNB1P20700 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.88□□□□□ -1.47
LMNB1P20700 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.88□□□□□ -1.47
LMNB1P20700 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.88□□□□□ -1.47
LMNB1P20700 AC009101.1-201ENST00000568135 242 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.88□□□□□ -1.47
LMNB1P20700 AP001429.1-201ENST00000602568 530 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 AC068722.2-201ENST00000618734 544 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 AL445567.2-201ENST00000618935 498 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 RNU6-156P-201ENST00000621869 107 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 AC024614.3-201ENST00000637860 256 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.88□□□□□ -1.47
LMNB1P20700 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LMNB1P20700 ZNF680P1-201ENST00000436625 1469 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
LMNB1P20700 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.88□□□□□ -1.47
LMNB1P20700 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LMNB1P20700 AL442639.1-201ENST00000625030 1899 ntBASIC5.88□□□□□ -1.47
LMNB1P20700 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LMNB1P20700 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LMNB1P20700 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LMNB1P20700 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
LMNB1P20700 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LMNB1P20700 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
LMNB1P20700 Y_RNA.86-201ENST00000363020 111 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 RNU4-73P-201ENST00000363164 141 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 RNU4-1-201ENST00000363925 141 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 RN7SKP280-201ENST00000364196 304 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 Y_RNA.356-201ENST00000365475 113 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 RNU1-39P-201ENST00000383897 165 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 RNU6-730P-201ENST00000383954 104 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 AL133384.1-201ENST00000412744 351 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 AL353777.1-201ENST00000425552 326 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.87□□□□□ -1.47
LMNB1P20700 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.87□□□□□ -1.47
LMNB1P20700 AC000111.2-201ENST00000448200 210 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 AL354710.1-201ENST00000453641 246 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 RPL7P15-201ENST00000461190 712 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.87□□□□□ -1.47
LMNB1P20700 AC079382.1-201ENST00000493346 557 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 NIFKP7-201ENST00000503365 834 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.87□□□□□ -1.47
LMNB1P20700 MRPL49P2-201ENST00000521066 465 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 ZNF705CP-201ENST00000530515 889 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 OR5AL2P-201ENST00000532185 920 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.87□□□□□ -1.47
LMNB1P20700 RN7SL802P-201ENST00000577858 299 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 MIR3167-201ENST00000579623 85 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 MIR3118-1-201ENST00000581787 76 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 AC006130.2-201ENST00000586202 326 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.87□□□□□ -1.47
LMNB1P20700 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.87□□□□□ -1.47
LMNB1P20700 AL162413.1-201ENST00000603198 110 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 AC090948.1-201ENST00000607464 549 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.87□□□□□ -1.47
LMNB1P20700 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.87□□□□□ -1.47
LMNB1P20700 MIR6839-201ENST00000620425 113 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 AL136221.1-201ENST00000621449 509 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 MTND1P37-201ENST00000636562 264 ntBASIC5.87□□□□□ -1.47
LMNB1P20700 BTBD10P1-201ENST00000549824 1352 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms