Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RPL21P129-201ENST00000491732 478 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.85□□□□□ -1.79
PDGFRAP16234 AC010460.2-201ENST00000509054 677 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 HIGD1AP10-201ENST00000527837 282 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.85□□□□□ -1.79
PDGFRAP16234 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.85□□□□□ -1.79
PDGFRAP16234 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.85□□□□□ -1.79
PDGFRAP16234 AC125611.1-201ENST00000549563 229 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.85□□□□□ -1.79
PDGFRAP16234 AC099489.2-201ENST00000574976 260 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 MIR4429-201ENST00000580105 73 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
PDGFRAP16234 AC124312.4-201ENST00000605533 310 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 RNU4-5P-201ENST00000607255 135 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 AC090425.2-201ENST00000608818 501 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFRAP16234 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.85□□□□□ -1.79
PDGFRAP16234 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.85□□□□□ -1.79
PDGFRAP16234 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFRAP16234 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFRAP16234 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFRAP16234 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.85□□□□□ -1.79
PDGFRAP16234 RNU6-216P-201ENST00000363282 104 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 RNU5D-1-201ENST00000363299 116 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 RNU6-413P-201ENST00000384115 107 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.84□□□□□ -1.79
PDGFRAP16234 RNU4-78P-201ENST00000410940 126 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 RNU4-22P-201ENST00000411058 166 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFRAP16234 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PDGFRAP16234 USP9YP31-201ENST00000431405 881 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 VN1R10P-201ENST00000447106 875 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.84□□□□□ -1.79
PDGFRAP16234 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.84□□□□□ -1.79
PDGFRAP16234 MTCYBP11-201ENST00000447254 1109 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFRAP16234 ZNF886P-201ENST00000450781 723 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFRAP16234 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.84□□□□□ -1.79
PDGFRAP16234 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.84□□□□□ -1.79
PDGFRAP16234 AC092757.1-201ENST00000467293 467 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 AC011979.1-201ENST00000472300 483 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 AP002812.1-201ENST00000495378 474 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFRAP16234 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.84□□□□□ -1.79
PDGFRAP16234 AC114322.1-201ENST00000506771 926 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFRAP16234 HMGN1P11-201ENST00000508668 303 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFRAP16234 RNU1-95P-201ENST00000516357 160 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 RNU1-128P-201ENST00000516704 160 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFRAP16234 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFRAP16234 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.84□□□□□ -1.79
PDGFRAP16234 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PDGFRAP16234 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.84□□□□□ -1.79
PDGFRAP16234 GTF2IP22-201ENST00000554443 182 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 AC141257.3-201ENST00000572906 215 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.84□□□□□ -1.79
PDGFRAP16234 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFRAP16234 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.84□□□□□ -1.79
PDGFRAP16234 KLKP1-201ENST00000595979 403 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 AC016877.3-201ENST00000606778 504 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.84□□□□□ -1.79
PDGFRAP16234 XIST_intron.1-201ENST00000619444 68 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 AC120349.2-201ENST00000625002 298 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 AC112200.1-201ENST00000625015 234 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 CYP3A51P-201ENST00000633513 256 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 MTND2P41-201ENST00000637599 773 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 OR6C71P-202ENST00000641886 1107 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 AC109315.1-201ENST00000584143 1347 ntBASIC3.84□□□□□ -1.79
PDGFRAP16234 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PDGFRAP16234 AC106754.1-201ENST00000562632 1513 ntBASIC3.84□□□□□ -1.8
PDGFRAP16234 CR381670.1-201ENST00000624291 1693 ntBASIC3.84□□□□□ -1.8
PDGFRAP16234 NUP58P1-201ENST00000502546 1738 ntBASIC3.84□□□□□ -1.8
PDGFRAP16234 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.8
PDGFRAP16234 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.84□□□□□ -1.8
PDGFRAP16234 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFRAP16234 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PDGFRAP16234 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFRAP16234 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.83□□□□□ -1.8
PDGFRAP16234 SNORA7.2-201ENST00000364446 145 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 SNORA51.2-201ENST00000364595 132 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 MIR23B-201ENST00000384832 97 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 RNU6-821P-201ENST00000390995 107 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 RPL21P17-201ENST00000397467 475 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFRAP16234 AL356320.2-201ENST00000417263 507 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 AL035423.1-201ENST00000420331 213 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.83□□□□□ -1.8
PDGFRAP16234 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.83□□□□□ -1.8
PDGFRAP16234 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.83□□□□□ -1.8
PDGFRAP16234 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.83□□□□□ -1.8
PDGFRAP16234 EEF1A1P39-201ENST00000440791 250 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.83□□□□□ -1.8
PDGFRAP16234 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.83□□□□□ -1.8
PDGFRAP16234 AC007327.1-201ENST00000447461 264 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 AC010655.1-201ENST00000449336 292 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 DUXAP8-207ENST00000456786 622 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 RPL7L1P8-201ENST00000469911 741 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms