Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC103798.2-201ENST00000624292 632 ntBASIC3.06□□□□□ -1.92
COL1A1P02452 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL1A1P02452 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL1A1P02452 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.06□□□□□ -1.92
COL1A1P02452 RNVU1-3-201ENST00000364313 161 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 RNA5SP210-201ENST00000391034 120 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 RNU6-482P-201ENST00000391068 107 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.05□□□□□ -1.92
COL1A1P02452 RNA5SP239-201ENST00000410218 129 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 MTND4LP13-201ENST00000425022 298 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 RPL7P12-201ENST00000446719 750 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 EIF2S2P4-201ENST00000461070 984 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 AC133134.1-201ENST00000466800 359 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 AP000926.1-201ENST00000479573 241 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 AC068305.1-201ENST00000497406 726 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 CKS1BP7-201ENST00000522230 235 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.05□□□□□ -1.92
COL1A1P02452 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.05□□□□□ -1.92
COL1A1P02452 AC006116.7-201ENST00000590141 756 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 AC090953.1-201ENST00000604305 1092 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 AC103810.6-201ENST00000606708 136 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.05□□□□□ -1.92
COL1A1P02452 AC009452.1-201ENST00000640823 606 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL1A1P02452 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.05□□□□□ -1.92
COL1A1P02452 AC010329.2-201ENST00000595195 2737 ntBASIC3.05□□□□□ -1.92
COL1A1P02452 CUL4AP1-201ENST00000514750 1863 ntBASIC3.04□□□□□ -1.92
COL1A1P02452 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL1A1P02452 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL1A1P02452 AC016717.2-201ENST00000609089 5141 ntBASIC3.04□□□□□ -1.92
COL1A1P02452 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.04□□□□□ -1.92
COL1A1P02452 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL1A1P02452 RNU2-6P-201ENST00000411404 190 ntBASIC3.04□□□□□ -1.92
COL1A1P02452 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.04□□□□□ -1.92
COL1A1P02452 RPL23AP23-201ENST00000452590 471 ntBASIC3.04□□□□□ -1.92
COL1A1P02452 AC008280.2-201ENST00000455473 307 ntBASIC3.04□□□□□ -1.92
COL1A1P02452 RPL9P33-201ENST00000484311 566 ntBASIC3.04□□□□□ -1.92
COL1A1P02452 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.04□□□□□ -1.92
COL1A1P02452 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.04□□□□□ -1.92
COL1A1P02452 OR4A45P-201ENST00000529954 901 ntBASIC3.04□□□□□ -1.92
COL1A1P02452 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.04□□□□□ -1.92
COL1A1P02452 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.04□□□□□ -1.92
COL1A1P02452 CKS1BP1-201ENST00000555221 240 ntBASIC3.04□□□□□ -1.92
COL1A1P02452 DEFB122-202ENST00000569013 197 ntBASIC3.04□□□□□ -1.92
COL1A1P02452 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.04□□□□□ -1.92
COL1A1P02452 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.04□□□□□ -1.92
COL1A1P02452 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.04□□□□□ -1.92
COL1A1P02452 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
COL1A1P02452 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL1A1P02452 AC006020.1-201ENST00000420179 1854 ntBASIC3.04□□□□□ -1.92
COL1A1P02452 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL1A1P02452 RNU1-100P-201ENST00000365255 165 ntBASIC3.03□□□□□ -1.92
COL1A1P02452 AC069218.2-201ENST00000411665 344 ntBASIC3.03□□□□□ -1.92
COL1A1P02452 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.03□□□□□ -1.92
COL1A1P02452 AL139415.2-201ENST00000431968 163 ntBASIC3.03□□□□□ -1.92
COL1A1P02452 ST13P20-201ENST00000447996 1065 ntBASIC3.03□□□□□ -1.92
COL1A1P02452 RPL23AP11-201ENST00000475260 469 ntBASIC3.03□□□□□ -1.92
COL1A1P02452 AC108210.2-201ENST00000503681 201 ntBASIC3.03□□□□□ -1.92
COL1A1P02452 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.03□□□□□ -1.92
COL1A1P02452 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.03□□□□□ -1.92
COL1A1P02452 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.03□□□□□ -1.92
COL1A1P02452 AC007938.3-201ENST00000604965 623 ntBASIC3.03□□□□□ -1.92
COL1A1P02452 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.03□□□□□ -1.92
COL1A1P02452 CRYM-AS1-204ENST00000637983 556 ntBASIC3.03□□□□□ -1.92
COL1A1P02452 AC241585.2-209ENST00000638217 143 ntBASIC3.03□□□□□ -1.92
COL1A1P02452 AC095050.2-201ENST00000510748 1458 ntBASIC3.03□□□□□ -1.92
COL1A1P02452 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL1A1P02452 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
COL1A1P02452 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
COL1A1P02452 USP9YP20-201ENST00000419224 558 ntBASIC3.03□□□□□ -1.93
COL1A1P02452 AL031736.2-201ENST00000426573 787 ntBASIC3.03□□□□□ -1.93
COL1A1P02452 AC093151.1-201ENST00000427711 313 ntBASIC3.03□□□□□ -1.93
COL1A1P02452 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.03□□□□□ -1.93
COL1A1P02452 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
COL1A1P02452 CEACAMP4-201ENST00000457676 421 ntBASIC3.03□□□□□ -1.93
COL1A1P02452 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.03□□□□□ -1.93
COL1A1P02452 AC092045.1-201ENST00000495716 1231 ntBASIC3.03□□□□□ -1.93
COL1A1P02452 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.03□□□□□ -1.93
COL1A1P02452 MIR4648-201ENST00000580107 72 ntBASIC3.03□□□□□ -1.93
COL1A1P02452 AC010200.2-201ENST00000605098 235 ntBASIC3.03□□□□□ -1.93
COL1A1P02452 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.03□□□□□ -1.93
COL1A1P02452 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL1A1P02452 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.02□□□□□ -1.93
COL1A1P02452 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.02□□□□□ -1.93
COL1A1P02452 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL1A1P02452 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL1A1P02452 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL1A1P02452 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
COL1A1P02452 EI24P2-201ENST00000397776 1076 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 AL359511.1-201ENST00000402970 211 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 SNORD88.1-201ENST00000408684 91 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.02□□□□□ -1.93
COL1A1P02452 Z98742.3-201ENST00000418637 326 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 AIMP1P1-201ENST00000418670 937 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.02□□□□□ -1.93
COL1A1P02452 AC092013.1-201ENST00000438795 332 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 GAPDHP27-201ENST00000447427 1020 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 RPL21P71-201ENST00000465598 459 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 RPL36AP51-201ENST00000487216 318 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 OR5H5P-201ENST00000503164 928 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms