Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 RNU1-32P-201ENST00000363937 159 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 RNU6-694P-201ENST00000364071 147 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.83□□□□□ -1.64
CDKL5O76039 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDKL5O76039 MIR3074-201ENST00000384885 81 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 TMSB4XP8-201ENST00000402089 135 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 TMSB4XP6-201ENST00000415187 135 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 AC004552.1-201ENST00000419089 348 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 AC009237.2-201ENST00000421358 284 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 TMSB4XP1-201ENST00000424567 135 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 RPL18P10-201ENST00000425606 538 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.83□□□□□ -1.64
CDKL5O76039 RPS6P12-201ENST00000432491 726 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 B3GNT2P1-201ENST00000434960 952 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 AL022238.1-201ENST00000442557 355 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 VN1R34P-201ENST00000447387 883 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 RPL18AP17-201ENST00000455326 198 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.83□□□□□ -1.64
CDKL5O76039 RPS26P3-201ENST00000470205 348 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 UQCRHP4-201ENST00000471686 272 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.83□□□□□ -1.64
CDKL5O76039 AL161747.1-201ENST00000480068 358 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 AC090543.2-201ENST00000483963 348 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 AC004057.1-201ENST00000485827 348 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 AL358832.1-201ENST00000497800 389 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 KRT19P6-201ENST00000510983 209 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.83□□□□□ -1.64
CDKL5O76039 DEFB108A-201ENST00000530110 222 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.83□□□□□ -1.64
CDKL5O76039 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.83□□□□□ -1.64
CDKL5O76039 ZNF519P2-201ENST00000557032 169 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 AC091135.1-201ENST00000585943 307 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.83□□□□□ -1.64
CDKL5O76039 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.83□□□□□ -1.64
CDKL5O76039 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.83□□□□□ -1.64
CDKL5O76039 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
CDKL5O76039 AC022140.2-201ENST00000623500 188 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.83□□□□□ -1.64
CDKL5O76039 AC120349.2-201ENST00000625002 298 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 MIR3653-201ENST00000625572 110 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 MIR7641-1-201ENST00000627518 61 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.83□□□□□ -1.64
CDKL5O76039 AL157786.1-207ENST00000627771 695 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 ASNSP1-204ENST00000641977 1664 ntBASIC4.83□□□□□ -1.64
CDKL5O76039 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.83□□□□□ -1.64
CDKL5O76039 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDKL5O76039 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
CDKL5O76039 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CDKL5O76039 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.82□□□□□ -1.64
CDKL5O76039 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDKL5O76039 ZNF37BP-203ENST00000452306 1352 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDKL5O76039 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDKL5O76039 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDKL5O76039 RNU6-297P-201ENST00000384636 107 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 Y_RNA.582-201ENST00000391023 95 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 RPL17P50-201ENST00000396131 546 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.82□□□□□ -1.64
CDKL5O76039 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.82□□□□□ -1.64
CDKL5O76039 AL389915.1-201ENST00000422463 466 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 AL158073.1-201ENST00000426848 1104 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.82□□□□□ -1.64
CDKL5O76039 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.82□□□□□ -1.64
CDKL5O76039 AC022022.1-201ENST00000430304 178 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 ELOCP18-201ENST00000434209 337 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.82□□□□□ -1.64
CDKL5O76039 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.82□□□□□ -1.64
CDKL5O76039 AC239367.2-201ENST00000447309 705 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 WASF1P1-201ENST00000447560 1131 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.82□□□□□ -1.64
CDKL5O76039 PAXBP1P1-201ENST00000449315 447 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 TPT1P13-201ENST00000449760 499 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 AC243772.1-201ENST00000451620 410 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.82□□□□□ -1.64
CDKL5O76039 RPL29P14-201ENST00000495837 428 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDKL5O76039 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDKL5O76039 AP002748.2-201ENST00000528671 348 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 DEFB109D-201ENST00000529497 240 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.82□□□□□ -1.64
CDKL5O76039 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.82□□□□□ -1.64
CDKL5O76039 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDKL5O76039 SERPINE4P-201ENST00000554978 281 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.82□□□□□ -1.64
CDKL5O76039 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.82□□□□□ -1.64
CDKL5O76039 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.82□□□□□ -1.64
CDKL5O76039 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.82□□□□□ -1.64
CDKL5O76039 AC243756.2-201ENST00000618406 463 ntBASIC4.82□□□□□ -1.64
CDKL5O76039 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CDKL5O76039 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDKL5O76039 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDKL5O76039 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDKL5O76039 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDKL5O76039 DBF4P1-201ENST00000412976 1892 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 CASC19-284ENST00000642142 1868 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AC119744.1-201ENST00000454746 1715 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AL451142.2-201ENST00000429076 2090 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDKL5O76039 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CDKL5O76039 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms