Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 BTF3P10-201ENST00000433415 495 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 HMGB3P9-201ENST00000441799 583 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 RPL23AP15-201ENST00000450202 459 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 AC005912.1-201ENST00000495392 255 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 ARL4AP2-201ENST00000507378 601 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 OR51K1P-201ENST00000510214 950 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 AC015795.1-201ENST00000513669 327 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.6□□□□□ -1.51
VAMP4O75379 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.6□□□□□ -1.51
VAMP4O75379 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.6□□□□□ -1.51
VAMP4O75379 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.6□□□□□ -1.51
VAMP4O75379 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.6□□□□□ -1.51
VAMP4O75379 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.6□□□□□ -1.51
VAMP4O75379 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.6□□□□□ -1.51
VAMP4O75379 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.6□□□□□ -1.51
VAMP4O75379 MIR5186-201ENST00000577504 120 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 MIR3138-201ENST00000585238 82 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 NRBF2P1-201ENST00000587407 859 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 AC022916.3-201ENST00000592961 742 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.6□□□□□ -1.51
VAMP4O75379 AL390208.1-201ENST00000605885 644 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 AC008536.2-201ENST00000607284 349 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 AC104260.1-201ENST00000616660 539 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 AC068880.5-201ENST00000624331 290 ntBASIC5.6□□□□□ -1.51
VAMP4O75379 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.6□□□□□ -1.51
VAMP4O75379 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP4O75379 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP4O75379 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP4O75379 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VAMP4O75379 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.6□□□□□ -1.51
VAMP4O75379 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP4O75379 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP4O75379 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP4O75379 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP4O75379 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP4O75379 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP4O75379 AC005332.5-201ENST00000591222 2919 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
VAMP4O75379 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP4O75379 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VAMP4O75379 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VAMP4O75379 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP4O75379 RNU6-809P-201ENST00000384461 107 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 SNORD66.1-201ENST00000391230 76 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP4O75379 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP4O75379 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.59□□□□□ -1.51
VAMP4O75379 PIGFP2-201ENST00000421400 651 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.59□□□□□ -1.51
VAMP4O75379 RNU7-136P-201ENST00000458819 69 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 RPL7P22-201ENST00000466005 733 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 AC023598.1-201ENST00000472521 361 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 AC010301.1-201ENST00000473936 355 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 RN7SL812P-201ENST00000493791 279 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 AC012170.1-201ENST00000495139 359 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.59□□□□□ -1.51
VAMP4O75379 MTCYBP18-201ENST00000501056 747 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.59□□□□□ -1.51
VAMP4O75379 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
VAMP4O75379 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
VAMP4O75379 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.59□□□□□ -1.51
VAMP4O75379 AC024589.1-201ENST00000512207 263 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 RNU6-358P-201ENST00000516564 75 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 SOD1P3-201ENST00000518682 454 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP4O75379 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.59□□□□□ -1.51
VAMP4O75379 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.59□□□□□ -1.51
VAMP4O75379 AC090312.1-201ENST00000580637 348 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 AC005730.3-201ENST00000583067 366 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 AC008752.3-201ENST00000588113 712 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.59□□□□□ -1.51
VAMP4O75379 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.59□□□□□ -1.51
VAMP4O75379 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.59□□□□□ -1.51
VAMP4O75379 AC114781.5-201ENST00000615297 108 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 MLECP1-201ENST00000615893 709 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VAMP4O75379 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.59□□□□□ -1.51
VAMP4O75379 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP4O75379 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.59□□□□□ -1.51
VAMP4O75379 AC090971.4-201ENST00000560291 1800 ntBASIC5.59□□□□□ -1.51
VAMP4O75379 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VAMP4O75379 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.59□□□□□ -1.51
VAMP4O75379 AC093591.2-201ENST00000565254 3843 ntBASIC5.59□□□□□ -1.52
VAMP4O75379 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
VAMP4O75379 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.59□□□□□ -1.52
VAMP4O75379 MAPK10-303ENST00000641324 3959 ntBASIC5.58□□□□□ -1.52
VAMP4O75379 ASNSP1-201ENST00000518311 1939 ntBASIC5.58□□□□□ -1.52
VAMP4O75379 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
VAMP4O75379 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VAMP4O75379 AC015813.6-201ENST00000624409 5808 ntBASIC5.58□□□□□ -1.52
VAMP4O75379 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
VAMP4O75379 OR11H5P-202ENST00000641612 1325 ntBASIC5.58□□□□□ -1.52
VAMP4O75379 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VAMP4O75379 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
VAMP4O75379 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VAMP4O75379 RNU6-181P-201ENST00000363225 107 ntBASIC5.58□□□□□ -1.52
VAMP4O75379 RNA5SP22-201ENST00000365393 109 ntBASIC5.58□□□□□ -1.52
VAMP4O75379 MT-TL1-201ENST00000386347 75 ntBASIC5.58□□□□□ -1.52
VAMP4O75379 RNU4-55P-201ENST00000410731 137 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms