Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.18□□□□□ -1.9
CLOCKO15516 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
CLOCKO15516 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
CLOCKO15516 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CLOCKO15516 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.17□□□□□ -1.9
CLOCKO15516 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLOCKO15516 MIR16-2-201ENST00000362117 81 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 RNU6-481P-201ENST00000384194 107 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 RNU6-921P-201ENST00000384361 107 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 MIR34B-201ENST00000385076 84 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 SNORD65C-201ENST00000390962 71 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLOCKO15516 RPL21P3-201ENST00000395517 478 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.17□□□□□ -1.9
CLOCKO15516 BX842559.1-201ENST00000419615 532 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.17□□□□□ -1.9
CLOCKO15516 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.17□□□□□ -1.9
CLOCKO15516 AC006548.1-201ENST00000427470 102 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.17□□□□□ -1.9
CLOCKO15516 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.17□□□□□ -1.9
CLOCKO15516 GAPDHP27-201ENST00000447427 1020 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 PRDX3P3-201ENST00000447765 522 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 GTF2IP12-201ENST00000456547 356 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.17□□□□□ -1.9
CLOCKO15516 SNORD105B-201ENST00000458770 79 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 AC146507.2-201ENST00000460608 476 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 PRDX3P4-201ENST00000470828 747 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.17□□□□□ -1.9
CLOCKO15516 AC093278.1-201ENST00000494700 600 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 OR5H5P-201ENST00000503164 928 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLOCKO15516 AC118282.1-201ENST00000506408 765 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.17□□□□□ -1.9
CLOCKO15516 AC025768.1-201ENST00000510057 267 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 AC119751.1-201ENST00000513357 765 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 HMGN1P15-201ENST00000513870 295 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.17□□□□□ -1.9
CLOCKO15516 RNA5SP217-201ENST00000515959 91 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 SNORA31.20-201ENST00000517111 133 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.17□□□□□ -1.9
CLOCKO15516 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.17□□□□□ -1.9
CLOCKO15516 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.17□□□□□ -1.9
CLOCKO15516 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
CLOCKO15516 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.17□□□□□ -1.9
CLOCKO15516 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.17□□□□□ -1.9
CLOCKO15516 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.17□□□□□ -1.9
CLOCKO15516 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.17□□□□□ -1.9
CLOCKO15516 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
CLOCKO15516 AL020997.3-201ENST00000602843 359 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.17□□□□□ -1.9
CLOCKO15516 AC025588.3-201ENST00000604182 274 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 ELOCP35-201ENST00000604289 336 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 AL445493.3-201ENST00000619568 477 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 U4.6-201ENST00000621618 127 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 AC243312.2-201ENST00000623340 601 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 AC106730.3-201ENST00000624568 641 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 CR381572.1-201ENST00000625098 102 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLOCKO15516 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.17□□□□□ -1.9
CLOCKO15516 AC007256.1-201ENST00000392253 2765 ntBASIC3.17□□□□□ -1.9
CLOCKO15516 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLOCKO15516 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
CLOCKO15516 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLOCKO15516 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CLOCKO15516 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLOCKO15516 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.16□□□□□ -1.9
CLOCKO15516 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CLOCKO15516 SNORD9-201ENST00000362566 104 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 RNA5SP50-201ENST00000363731 107 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLOCKO15516 RNA5SP129-201ENST00000410276 118 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.16□□□□□ -1.9
CLOCKO15516 RPL23AP83-201ENST00000434984 473 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.16□□□□□ -1.9
CLOCKO15516 HSFY3P-201ENST00000444242 1191 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.16□□□□□ -1.9
CLOCKO15516 RPL21P23-201ENST00000446654 460 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.16□□□□□ -1.9
CLOCKO15516 PLGLA-201ENST00000465668 449 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 AC074250.1-201ENST00000511117 192 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 SNORA70.18-201ENST00000516696 98 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 SCARNA20.6-201ENST00000517251 106 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.16□□□□□ -1.9
CLOCKO15516 AL163153.1-201ENST00000554223 283 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.16□□□□□ -1.9
CLOCKO15516 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.16□□□□□ -1.9
CLOCKO15516 AC007179.3-201ENST00000604976 235 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 AL118556.2-201ENST00000614375 824 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 AC090116.1-201ENST00000615679 446 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.16□□□□□ -1.9
CLOCKO15516 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CLOCKO15516 AC097460.3-201ENST00000623099 442 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 AC098679.5-201ENST00000624394 571 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 U6.105-201ENST00000637379 88 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 AL392088.2-201ENST00000637607 285 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 AC004925.1-201ENST00000624256 2706 ntBASIC3.16□□□□□ -1.9
CLOCKO15516 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLOCKO15516 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLOCKO15516 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLOCKO15516 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms