Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 FKBP1BP1-201ENST00000553366 325 ntBASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 HIF1AP1-201ENST00000553642 175 ntBASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 AC018552.1-201ENST00000562099 811 ntBASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 RN7SL802P-201ENST00000577858 299 ntBASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 MIR5699-201ENST00000578903 90 ntBASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 AC007038.2-201ENST00000608095 740 ntBASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHB4Q9Y5E5 Z95327.2-201ENST00000414579 1873 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 Y_RNA.86-201ENST00000363020 111 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 RNU4-73P-201ENST00000363164 141 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 RNY3P3-201ENST00000363816 102 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 RNU6-1322P-201ENST00000364309 107 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 RNU6-730P-201ENST00000383954 104 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AL023807.1-201ENST00000407932 359 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AL353777.1-201ENST00000425552 326 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 OR51AB1P-201ENST00000429046 620 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 HMGB3P12-201ENST00000438745 556 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 OR1H1P-201ENST00000448731 937 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 FDX1P2-201ENST00000450769 375 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 RPS20P24-201ENST00000457473 361 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AC063943.1-201ENST00000465434 453 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AC020890.1-201ENST00000491837 504 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AC091868.1-201ENST00000508746 304 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AC011468.4-201ENST00000603942 409 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AL031320.1-201ENST00000604177 357 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AC009159.1-201ENST00000618386 642 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AL445487.1-201ENST00000415694 1580 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 AL359922.3-201ENST00000624779 1670 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 MAPK10-263ENST00000641052 4307 ntBASIC5.11□□□□□ -1.59
PCDHB4Q9Y5E5 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 AL136164.3-201ENST00000624429 3978 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 OR52B1P-201ENST00000316506 909 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 RNU5E-1-201ENST00000362477 120 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 RNU6-853P-201ENST00000364306 107 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 RNU1-39P-201ENST00000383897 165 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 RNU6-878P-201ENST00000384578 110 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 Y_RNA.529-201ENST00000384586 119 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 MRPL42P2-201ENST00000403169 426 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 AC008850.1-201ENST00000427546 362 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 GTF2IP20-201ENST00000431663 360 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 RPL12P3-201ENST00000440080 396 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 RPS5P7-201ENST00000456664 608 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 RPL7P15-201ENST00000461190 712 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 AC104563.1-201ENST00000476147 376 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 RPL36AP51-201ENST00000487216 318 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 RPL39P36-201ENST00000490784 156 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 AC034222.1-201ENST00000494052 532 ntBASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHB4Q9Y5E5 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms