Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AC078880.4-201ENST00000617627 1749 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AC135776.4-201ENST00000624300 1904 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 RNU6-989P-201ENST00000362756 107 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 Y_RNA.446-201ENST00000384178 104 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AL390729.2-201ENST00000416137 156 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 RN7SL254P-201ENST00000460609 284 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 RN7SL751P-201ENST00000473281 284 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 HMGN1P11-201ENST00000508668 303 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 HMGB3P3-201ENST00000510526 400 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 RNU6-27P-201ENST00000516146 107 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AC090281.1-201ENST00000523019 276 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 SNRPGP16-201ENST00000533275 226 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AC005519.1-201ENST00000554490 601 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AP000787.2-201ENST00000604432 568 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AC123769.1-201ENST00000530992 3192 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 BTBD10P1-201ENST00000549824 1352 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.51□□□□□ -1.37
LHX6Q9UPM6 AC011008.2-201ENST00000624866 3352 ntBASIC6.51□□□□□ -1.37
LHX6Q9UPM6 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 PWAR1-201ENST00000624188 2414 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 RNU6-926P-201ENST00000384075 107 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 MIR640-201ENST00000385086 96 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 AL096701.2-201ENST00000416920 238 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 EBAG9P1-201ENST00000418955 543 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 AC073901.1-201ENST00000462471 408 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 RNU7-121P-201ENST00000516604 62 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 Y_RNA.694-201ENST00000516677 117 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 IGLVI-42-201ENST00000522485 381 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 AC055872.1-201ENST00000570978 278 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 AC008749.1-201ENST00000597650 306 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 AC099667.1-201ENST00000624222 469 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 AC129915.3-201ENST00000634128 948 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 AC092821.2-201ENST00000545710 2042 ntBASIC6.5□□□□□ -1.37
LHX6Q9UPM6 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
LHX6Q9UPM6 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms