Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MIR2114-201ENST00000516645 80 ntBASIC4.03□□□□□ -1.76
RIMBP3Q9UFD9 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.03□□□□□ -1.76
RIMBP3Q9UFD9 AL049555.1-201ENST00000562834 1933 ntBASIC4.03□□□□□ -1.76
RIMBP3Q9UFD9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
RIMBP3Q9UFD9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
RIMBP3Q9UFD9 FAR1P1-201ENST00000427163 934 ntBASIC4.03□□□□□ -1.77
RIMBP3Q9UFD9 RNU6-1334P-201ENST00000516032 105 ntBASIC4.03□□□□□ -1.77
RIMBP3Q9UFD9 AC010620.2-201ENST00000600135 313 ntBASIC4.03□□□□□ -1.77
RIMBP3Q9UFD9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RIMBP3Q9UFD9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RIMBP3Q9UFD9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RIMBP3Q9UFD9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.02□□□□□ -1.77
RIMBP3Q9UFD9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.02□□□□□ -1.77
RIMBP3Q9UFD9 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.02□□□□□ -1.77
RIMBP3Q9UFD9 CYCSP20-201ENST00000473154 315 ntBASIC4.02□□□□□ -1.77
RIMBP3Q9UFD9 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.02□□□□□ -1.77
RIMBP3Q9UFD9 AC015911.5-201ENST00000587076 451 ntBASIC4.02□□□□□ -1.77
RIMBP3Q9UFD9 VN1R80P-201ENST00000597126 338 ntBASIC4.02□□□□□ -1.77
RIMBP3Q9UFD9 AC128687.1-201ENST00000605304 619 ntBASIC4.02□□□□□ -1.77
RIMBP3Q9UFD9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 XKRY2-202ENST00000623874 1581 ntBASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 XKRY-202ENST00000624960 1581 ntBASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 AC245291.1-201ENST00000419501 328 ntBASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 FABP5P12-201ENST00000515543 389 ntBASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 AC011494.1-201ENST00000596454 237 ntBASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 AC008277.2-201ENST00000605196 797 ntBASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 MIR6873-201ENST00000622788 63 ntBASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RIMBP3Q9UFD9 SNORD56.3-201ENST00000363507 71 ntBASIC4□□□□□ -1.77
RIMBP3Q9UFD9 RPL32P35-201ENST00000415214 394 ntBASIC4□□□□□ -1.77
RIMBP3Q9UFD9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4□□□□□ -1.77
RIMBP3Q9UFD9 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4□□□□□ -1.77
RIMBP3Q9UFD9 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4□□□□□ -1.77
RIMBP3Q9UFD9 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4□□□□□ -1.77
RIMBP3Q9UFD9 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4□□□□□ -1.77
RIMBP3Q9UFD9 RN7SL622P-201ENST00000585292 275 ntBASIC4□□□□□ -1.77
RIMBP3Q9UFD9 AL391813.2-201ENST00000609113 322 ntBASIC4□□□□□ -1.77
RIMBP3Q9UFD9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4□□□□□ -1.77
RIMBP3Q9UFD9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RIMBP3Q9UFD9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4□□□□□ -1.77
RIMBP3Q9UFD9 DDX18P3-201ENST00000404856 2007 ntBASIC4□□□□□ -1.77
RIMBP3Q9UFD9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
RIMBP3Q9UFD9 AC009487.2-201ENST00000420969 6821 ntBASIC4□□□□□ -1.77
RIMBP3Q9UFD9 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 OR52B1P-201ENST00000316506 909 ntBASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 RNU1-75P-201ENST00000347264 129 ntBASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 HPRT1P3-201ENST00000539521 576 ntBASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 AC074140.1-201ENST00000621617 208 ntBASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 AL356490.1-201ENST00000623079 479 ntBASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 SNORA26.9-201ENST00000391322 122 ntBASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 CYCSP49-201ENST00000420810 319 ntBASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 GTF2IP23-201ENST00000423746 351 ntBASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 CACYBPP2-201ENST00000453625 678 ntBASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 AC021733.2-201ENST00000518830 497 ntBASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 AC128657.1-201ENST00000549459 145 ntBASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 AL022099.1-201ENST00000604551 712 ntBASIC3.99□□□□□ -1.77
RIMBP3Q9UFD9 EXOC5P1-201ENST00000510543 1969 ntBASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 AC026523.2-201ENST00000625039 7739 ntBASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 AL139276.1-201ENST00000311910 1001 ntBASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 RPS7P13-201ENST00000413955 498 ntBASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 AC108078.2-201ENST00000510750 236 ntBASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 RNA5SP490-201ENST00000517141 136 ntBASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 AC026241.1-201ENST00000517873 2142 ntBASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 AC020895.1-201ENST00000595362 272 ntBASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 AP004372.1-201ENST00000604842 844 ntBASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 AL365503.1-201ENST00000605247 905 ntBASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 AL359821.1-201ENST00000605519 182 ntBASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 LINC00901.1-201ENST00000617252 152 ntBASIC3.98□□□□□ -1.77
RIMBP3Q9UFD9 AC093831.2-201ENST00000624393 3427 ntBASIC3.97□□□□□ -1.77
RIMBP3Q9UFD9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.97□□□□□ -1.77
RIMBP3Q9UFD9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms