Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RNU6-353P-201ENST00000364266 108 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 SNORD6-201ENST00000365444 73 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 SSXP10-201ENST00000402595 565 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 EI24P1-201ENST00000416584 867 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 RPP40P1-201ENST00000426762 456 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 AL353705.1-201ENST00000433468 480 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 CYCSP32-201ENST00000440548 321 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 AL592437.1-201ENST00000443781 492 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 RPL5P24-201ENST00000463742 885 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 RPS4XP22-201ENST00000480755 780 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 RNF138P1-201ENST00000502765 546 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 TRAV31-201ENST00000502780 342 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 AC011352.3-201ENST00000505162 593 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 CYB5AP5-201ENST00000549779 389 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 MIR2682-201ENST00000580305 110 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 uc_338.1-201ENST00000612113 180 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 VN1R74P-201ENST00000613259 503 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 SAGE4P-201ENST00000442271 3381 ntBASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
HMG20BQ9P0W2 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 GABPAP-201ENST00000419271 1356 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 RNU6-207P-201ENST00000384137 107 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 RNU6-441P-201ENST00000384545 106 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 MIR16-1-201ENST00000385271 89 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 SFR1P1-201ENST00000403720 688 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 GSTA8P-201ENST00000404253 637 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 RPS3AP9-201ENST00000417027 792 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 RPL31P12-201ENST00000422587 358 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AC006028.1-201ENST00000438379 402 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 ISCA1P2-201ENST00000438679 421 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 HMGB3P11-201ENST00000440127 604 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 Z99127.3-201ENST00000448158 395 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 RPL21P18-201ENST00000469899 480 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AC017015.1-201ENST00000477387 286 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 DSTNP2-201ENST00000504533 515 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 USP9YP5-201ENST00000511770 630 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AC091515.1-201ENST00000548110 679 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AC008507.1-201ENST00000587506 734 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 PABPC1P7-201ENST00000413177 1513 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 SEPT7P7-201ENST00000420492 1301 ntBASIC3.95□□□□□ -1.78
HMG20BQ9P0W2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 RNU6-1226P-201ENST00000384317 107 ntBASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 SNORA48.2-201ENST00000390926 124 ntBASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 AL355615.1-201ENST00000406187 641 ntBASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 RNU4-47P-201ENST00000410876 114 ntBASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 AC096632.1-201ENST00000427395 310 ntBASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 AC127537.2-201ENST00000439258 465 ntBASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 RPL7P59-201ENST00000447700 943 ntBASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 NPM1P49-201ENST00000448027 714 ntBASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 NAMPTP2-201ENST00000505629 1115 ntBASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 AP003355.1-201ENST00000518956 587 ntBASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.94□□□□□ -1.78
HMG20BQ9P0W2 AP001207.1-201ENST00000524051 481 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms