Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC112198.1-201ENST00000505369 1220 ntBASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 RN7SKP13-201ENST00000515933 244 ntBASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 RN7SKP18-201ENST00000516005 275 ntBASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 RN7SKP116-201ENST00000516902 319 ntBASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 IGKV2D-36-201ENST00000518643 226 ntBASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 ARL2BPP5-201ENST00000523141 481 ntBASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 OR4R3P-201ENST00000525084 838 ntBASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 AC092628.2-201ENST00000622492 339 ntBASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 AC068620.4-201ENST00000636730 1182 ntBASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 PABPC1P7-201ENST00000413177 1513 ntBASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.81□□□□□ -1.96
HDHD3Q9BSH5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC130650.2-201ENST00000618736 2403 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 HMGB1P5-201ENST00000255320 642 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 RNU4-35P-201ENST00000362588 141 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 RNU1-70P-201ENST00000362618 164 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 RNA5SP124-201ENST00000362739 110 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 SNORA73.2-201ENST00000364946 201 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 RNU6-730P-201ENST00000383954 104 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 RNU6-224P-201ENST00000384055 107 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 RNU6-925P-201ENST00000384629 104 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 SNORD17-201ENST00000390930 237 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 EI24P2-201ENST00000397776 1076 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AL133264.1-201ENST00000407157 562 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 RNA5SP293-201ENST00000410527 113 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 KRR1P1-201ENST00000419430 803 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 OR51AB1P-201ENST00000429046 620 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 NANOGP2-201ENST00000435391 727 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC093155.1-201ENST00000440164 826 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 HMGB3P8-201ENST00000449709 577 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 SNORD105B-201ENST00000458770 79 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 RN7SL385P-201ENST00000468873 276 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 SNRPGP3-201ENST00000469405 227 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AL136126.1-201ENST00000473603 402 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 UBE2V1P12-201ENST00000503954 474 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC114967.1-201ENST00000504890 259 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 PTGES3P3-201ENST00000511479 482 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 SNORA48.10-201ENST00000516965 160 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC021451.1-201ENST00000523498 1129 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AP001317.1-201ENST00000531194 960 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC092470.1-201ENST00000546187 132 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 CENPUP2-201ENST00000555897 1186 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC093519.1-201ENST00000566109 298 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC136624.4-201ENST00000573044 370 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 MIR5708-201ENST00000579723 85 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 OR4G1P-201ENST00000588632 938 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 VN1R83P-201ENST00000595685 445 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC091946.2-201ENST00000606105 291 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AL121772.2-201ENST00000614331 297 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC068724.3-201ENST00000625906 87 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 AC099654.9-201ENST00000637055 678 ntBASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HDHD3Q9BSH5 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.79□□□□□ -1.96
HDHD3Q9BSH5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HDHD3Q9BSH5 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HDHD3Q9BSH5 CR383658.2-201ENST00000547576 1525 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms