Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC026412.2-201ENST00000512270 1075 ntBASIC2.16□□□□□ -2.06
COL12A1Q99715 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.16□□□□□ -2.06
COL12A1Q99715 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
COL12A1Q99715 MIR3199-1-201ENST00000582434 88 ntBASIC2.16□□□□□ -2.06
COL12A1Q99715 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.16□□□□□ -2.06
COL12A1Q99715 AL022099.1-201ENST00000604551 712 ntBASIC2.16□□□□□ -2.06
COL12A1Q99715 AL355493.4-201ENST00000618530 292 ntBASIC2.16□□□□□ -2.06
COL12A1Q99715 AC007342.7-201ENST00000624610 2337 ntBASIC2.16□□□□□ -2.06
COL12A1Q99715 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.15□□□□□ -2.06
COL12A1Q99715 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
COL12A1Q99715 POLR2J4-204ENST00000418424 324 ntBASIC2.15□□□□□ -2.06
COL12A1Q99715 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.15□□□□□ -2.06
COL12A1Q99715 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.15□□□□□ -2.06
COL12A1Q99715 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.15□□□□□ -2.06
COL12A1Q99715 HSPE1P18-201ENST00000517602 280 ntBASIC2.15□□□□□ -2.06
COL12A1Q99715 AC021733.2-201ENST00000518830 497 ntBASIC2.15□□□□□ -2.06
COL12A1Q99715 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.15□□□□□ -2.06
COL12A1Q99715 AL109809.4-201ENST00000603520 2185 ntBASIC2.15□□□□□ -2.07
COL12A1Q99715 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
COL12A1Q99715 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
COL12A1Q99715 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
COL12A1Q99715 AC011460.1-201ENST00000636268 1834 ntBASIC2.15□□□□□ -2.07
COL12A1Q99715 EI24P2-201ENST00000397776 1076 ntBASIC2.15□□□□□ -2.07
COL12A1Q99715 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.15□□□□□ -2.07
COL12A1Q99715 AC006111.3-201ENST00000622137 383 ntBASIC2.15□□□□□ -2.07
COL12A1Q99715 AC016542.2-201ENST00000624201 619 ntBASIC2.15□□□□□ -2.07
COL12A1Q99715 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
COL12A1Q99715 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
COL12A1Q99715 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
COL12A1Q99715 AC087565.3-202ENST00000642085 1603 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 MIR148B-201ENST00000362252 99 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 RNA5SP274-201ENST00000410484 108 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AC006960.1-201ENST00000419980 153 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COL12A1Q99715 AC087385.1-201ENST00000475062 312 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.14□□□□□ -2.07
COL12A1Q99715 NIPA2P2-201ENST00000496376 1083 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AC005840.1-201ENST00000498412 377 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 ARL2BPP6-201ENST00000512757 439 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.14□□□□□ -2.07
COL12A1Q99715 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.14□□□□□ -2.07
COL12A1Q99715 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.14□□□□□ -2.07
COL12A1Q99715 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC2.14□□□□□ -2.07
COL12A1Q99715 MFSD8-245ENST00000641743 948 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AP006437.1-201ENST00000641440 3685 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.14□□□□□ -2.07
COL12A1Q99715 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
COL12A1Q99715 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL12A1Q99715 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.14□□□□□ -2.07
COL12A1Q99715 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
COL12A1Q99715 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COL12A1Q99715 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL12A1Q99715 AP000936.3-201ENST00000438127 255 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 MOB1AP2-201ENST00000446060 614 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AC093392.2-201ENST00000450682 337 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 TVP23BP2-201ENST00000455082 615 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 RN7SL442P-201ENST00000473804 320 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AP000893.1-201ENST00000474462 794 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AC026436.1-201ENST00000510537 270 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.14□□□□□ -2.07
COL12A1Q99715 MIR3605-201ENST00000583214 100 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AC008507.1-201ENST00000587506 734 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AC063952.1-203ENST00000634410 658 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.14□□□□□ -2.07
COL12A1Q99715 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COL12A1Q99715 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL12A1Q99715 RNU4-44P-201ENST00000363050 141 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 BX679664.1-201ENST00000434429 253 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 ELOCP31-201ENST00000540463 467 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.14□□□□□ -2.07
COL12A1Q99715 AP000919.1-202ENST00000581139 1264 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AC015911.5-201ENST00000587076 451 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AP001521.1-201ENST00000609150 300 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 AL589994.2-201ENST00000621124 579 ntBASIC2.14□□□□□ -2.07
COL12A1Q99715 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.13□□□□□ -2.07
COL12A1Q99715 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
COL12A1Q99715 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL12A1Q99715 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.13□□□□□ -2.07
COL12A1Q99715 AL035551.1-201ENST00000446931 348 ntBASIC2.13□□□□□ -2.07
COL12A1Q99715 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.13□□□□□ -2.07
COL12A1Q99715 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
COL12A1Q99715 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.13□□□□□ -2.07
COL12A1Q99715 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.13□□□□□ -2.07
COL12A1Q99715 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
COL12A1Q99715 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
COL12A1Q99715 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
COL12A1Q99715 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL12A1Q99715 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL12A1Q99715 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.13□□□□□ -2.07
COL12A1Q99715 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL12A1Q99715 RNY1P10-201ENST00000363268 113 ntBASIC2.13□□□□□ -2.07
COL12A1Q99715 GCNT6-201ENST00000379591 934 ntBASIC2.13□□□□□ -2.07
COL12A1Q99715 RPL32P35-201ENST00000415214 394 ntBASIC2.13□□□□□ -2.07
COL12A1Q99715 BTF3P4-201ENST00000418852 495 ntBASIC2.13□□□□□ -2.07
COL12A1Q99715 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.13□□□□□ -2.07
COL12A1Q99715 AC007395.1-201ENST00000451333 677 ntBASIC2.13□□□□□ -2.07
COL12A1Q99715 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.13□□□□□ -2.07
COL12A1Q99715 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.13□□□□□ -2.07
COL12A1Q99715 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.13□□□□□ -2.07
COL12A1Q99715 AC011611.5-201ENST00000552477 578 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms