Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 HMGB3P23-201ENST00000414981 585 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC010881.1-201ENST00000433830 235 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 RPL29P29-201ENST00000448725 423 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AP001086.1-201ENST00000494882 321 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 RNA5SP385-201ENST00000515947 110 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC007536.1-201ENST00000533382 349 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 MTND5P27-201ENST00000428871 1720 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 BTF3P7-201ENST00000407097 488 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 UQCRHP3-201ENST00000451503 251 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC107081.3-201ENST00000612715 2034 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 MIR181B1-201ENST00000385240 110 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 OR6K1P-201ENST00000456766 971 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC135999.1-201ENST00000478962 479 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AL159169.2-201ENST00000610061 1269 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 RNA5SP309-201ENST00000516670 106 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 DCAF13P3-201ENST00000561147 1334 ntBASIC1.8□□□□□ -2.12
ALMS1Q8TCU4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 HIGD1AP2-201ENST00000446367 280 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 AC022431.1-201ENST00000450941 438 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 HMGN1P5-201ENST00000448591 263 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 MTCO3P20-201ENST00000454926 688 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 RPL23AP44-201ENST00000482216 473 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 AP000926.3-201ENST00000497201 299 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 AP001317.1-201ENST00000531194 960 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 AP000942.3-201ENST00000603702 160 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 SNORA35B-201ENST00000607417 129 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 AL356490.1-201ENST00000623079 479 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 RANP7-201ENST00000418085 644 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 AC245291.1-201ENST00000419501 328 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 OR2AS1P-201ENST00000427827 319 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 OR5H5P-201ENST00000503164 928 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 AC123768.4-201ENST00000616244 701 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 LRRC77P-213ENST00000637727 880 ntBASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.79□□□□□ -2.12
ALMS1Q8TCU4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms