Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BEST4Q8NFU0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BEST4Q8NFU0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BEST4Q8NFU0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
BEST4Q8NFU0 OR5BR1P-201ENST00000524992 1330 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 RNU4-28P-201ENST00000364739 141 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AP002088.1-201ENST00000382740 395 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 RNU6-1122P-201ENST00000384449 107 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 RPS26P8-201ENST00000393490 348 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 ATP5F1P3-201ENST00000397213 657 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 RSL24D1P4-201ENST00000400938 484 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AL133270.1-201ENST00000402635 279 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AL772161.1-201ENST00000439130 476 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 EEF1E1P1-201ENST00000446998 430 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 SNORD108-201ENST00000459332 71 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 RPS15AP17-201ENST00000470598 390 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AP002884.2-201ENST00000471647 395 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC020898.1-201ENST00000474167 787 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC068587.2-201ENST00000478386 781 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 RPL21P103-201ENST00000479921 488 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 RPS4XP22-201ENST00000480755 780 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 NCOR1P1-202ENST00000486162 291 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 ACTG1P13-201ENST00000486987 1043 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC093840.1-201ENST00000511599 336 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC026412.2-201ENST00000512270 1075 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC109445.1-201ENST00000512356 383 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 RNU6-583P-201ENST00000516012 92 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 RNU5A-4P-201ENST00000516588 111 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 OR4P1P-201ENST00000530808 1136 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC008011.1-201ENST00000545989 227 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC107954.1-201ENST00000565906 727 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AL354943.1-201ENST00000572103 781 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 OR4K7P-201ENST00000580232 945 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC243773.3-201ENST00000613270 256 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC018755.4-201ENST00000619715 454 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AP000676.3-201ENST00000623299 569 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AC231657.1-201ENST00000624313 397 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 AP000526.1-201ENST00000603308 1388 ntBASIC3.2□□□□□ -1.9
BEST4Q8NFU0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
BEST4Q8NFU0 SEPT7P7-201ENST00000420492 1301 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
BEST4Q8NFU0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.19□□□□□ -1.9
BEST4Q8NFU0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.19□□□□□ -1.9
BEST4Q8NFU0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.19□□□□□ -1.9
BEST4Q8NFU0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
BEST4Q8NFU0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.19□□□□□ -1.9
BEST4Q8NFU0 RNU6-339P-201ENST00000384310 107 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BEST4Q8NFU0 AF228730.1-201ENST00000397972 663 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 MIR1284-201ENST00000408337 120 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.19□□□□□ -1.9
BEST4Q8NFU0 AC016397.1-201ENST00000412463 242 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 HSFY4P-201ENST00000415994 1181 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 AC017079.2-201ENST00000416102 485 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 TOMM22P1-201ENST00000418578 312 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 RPL31P45-201ENST00000419532 356 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 Z97055.1-201ENST00000419730 712 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 AL691449.1-201ENST00000426570 421 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 MTATP6P17-201ENST00000431030 672 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 MTCO2P25-201ENST00000447065 681 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.19□□□□□ -1.9
BEST4Q8NFU0 OR6C5P-201ENST00000452388 923 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.19□□□□□ -1.9
BEST4Q8NFU0 RPL23AP62-201ENST00000463396 453 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.19□□□□□ -1.9
BEST4Q8NFU0 TMEM248P1-201ENST00000510579 951 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 MTCYBP43-201ENST00000513621 740 ntBASIC3.19□□□□□ -1.9
BEST4Q8NFU0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.19□□□□□ -1.9
BEST4Q8NFU0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BEST4Q8NFU0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms