Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 AC012618.3-205ENST00000637896 1496 ntBASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71LQ8N9Z2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 SNORA62-201ENST00000365493 153 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 SNORD82-201ENST00000365530 70 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 RNU6-339P-201ENST00000384310 107 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 MIR585-201ENST00000384887 94 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 SNORD65.1-201ENST00000390889 71 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 RNU6-1300P-201ENST00000391046 108 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 U3.39-201ENST00000408569 239 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 RNU4-22P-201ENST00000411058 166 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 MTATP6P20-201ENST00000414147 562 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 RPS3AP37-201ENST00000419176 745 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 RPF2P1-201ENST00000424137 906 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 USP9YP24-201ENST00000434374 697 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 USP9YP17-201ENST00000444617 696 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC079776.3-201ENST00000450665 370 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 NECAP1P2-201ENST00000455668 727 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 MTCO3P2-201ENST00000457365 171 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 SYPL1P1-201ENST00000473622 768 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 HMGN2P13-201ENST00000476476 274 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC013828.1-201ENST00000481845 158 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 MTCO3P35-201ENST00000485582 781 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC108078.3-201ENST00000502633 489 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC034205.1-201ENST00000520621 638 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 CR383656.6-201ENST00000550518 394 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 TRAV37-201ENST00000553906 342 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 MIR4277-201ENST00000578298 84 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 MIR5096-201ENST00000583713 70 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC015688.2-201ENST00000584523 262 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC107982.3-201ENST00000584957 985 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 MIR4760-201ENST00000585040 80 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 VN1R83P-201ENST00000595685 445 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 IGHV3-29-201ENST00000604817 344 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC124312.4-201ENST00000605533 310 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC106052.1-201ENST00000608029 497 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AL121895.2-201ENST00000619558 447 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC091046.2-201ENST00000620775 665 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC022149.2-201ENST00000621061 203 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 AC023510.2-201ENST00000622162 746 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 MIR6500-201ENST00000622700 86 ntBASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3□□□□□ -1.93
CCDC71LQ8N9Z2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 AP001350.1-201ENST00000601906 1524 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 Z99496.1-201ENST00000469424 1477 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 OR6C69P-201ENST00000394268 893 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 AC016769.3-201ENST00000396562 315 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 SKINT1L-201ENST00000401057 817 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 MTND4LP20-201ENST00000402379 270 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 RPL21P65-201ENST00000406094 466 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 AL583834.1-201ENST00000406943 343 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 SNORA3.3-201ENST00000408712 125 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 RNA5SP129-201ENST00000410276 118 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 RNA5SP56-201ENST00000410277 118 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 Z75741.2-201ENST00000417272 1167 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 FNDC3CP-201ENST00000420795 1155 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 DPRXP1-201ENST00000426312 460 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 RPL21P40-201ENST00000428586 483 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 NANOGP2-201ENST00000435391 727 ntBASIC2.99□□□□□ -1.93
CCDC71LQ8N9Z2 EEF1A1P39-201ENST00000440791 250 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms