Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC015871.2-201ENST00000603605 948 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 RBM11P1-201ENST00000604951 799 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC004825.2-201ENST00000616634 455 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC138932.5-201ENST00000617759 563 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AL445363.3-201ENST00000623080 671 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AL160394.1-201ENST00000624765 724 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC090971.4-201ENST00000560291 1800 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC005832.2-201ENST00000538921 1430 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC114546.3-201ENST00000623582 1734 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 MIR423-201ENST00000362201 94 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 RNU6-462P-201ENST00000362659 105 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 RNU6-444P-201ENST00000383988 108 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 RNU6-1042P-201ENST00000384204 107 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 SNRPEP2-201ENST00000397592 279 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 RN7SKP56-201ENST00000410513 331 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 MTCYBP5-201ENST00000423752 1135 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 ZYG11AP1-201ENST00000430329 837 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC023347.2-201ENST00000433994 462 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 RPS20P1-201ENST00000434853 354 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 MTATP6P13-201ENST00000438531 667 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AL512326.1-201ENST00000443050 721 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 TRGVB-201ENST00000453257 471 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC096751.1-202ENST00000502691 1067 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC017037.1-201ENST00000508460 471 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 IGHV3-32-201ENST00000519182 355 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 EIF5A2P1-201ENST00000564027 460 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 MIR4801-201ENST00000582704 82 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC083760.1-201ENST00000589621 670 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC119501.1-201ENST00000603646 475 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC110741.2-201ENST00000605278 268 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC090948.1-201ENST00000607464 549 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC243773.3-201ENST00000613270 256 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AL357080.1-201ENST00000617394 239 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC140479.6-201ENST00000633535 357 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC106871.1-201ENST00000568324 3102 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 EIF2AP4-201ENST00000424793 1781 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 TEX21P-201ENST00000447107 1476 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC095050.2-201ENST00000510748 1458 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 AC012618.3-205ENST00000637896 1496 ntBASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP4Q8N3C7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
CLIP4Q8N3C7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.9□□□□□ -1.78
CLIP4Q8N3C7 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.9□□□□□ -1.78
CLIP4Q8N3C7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.9□□□□□ -1.78
CLIP4Q8N3C7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLIP4Q8N3C7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.9□□□□□ -1.78
CLIP4Q8N3C7 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.9□□□□□ -1.78
CLIP4Q8N3C7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLIP4Q8N3C7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 MIR937-201ENST00000401271 86 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 RNA5SP36-201ENST00000410197 133 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 RN7SKP235-201ENST00000410662 305 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 RPL17P12-201ENST00000413391 526 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 HMGB1P11-201ENST00000413899 637 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC008280.1-201ENST00000418851 412 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC083875.1-201ENST00000419509 405 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AL389915.1-201ENST00000422463 466 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms