Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 BDP1P-201ENST00000582658 1990 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 RNU6-560P-201ENST00000364007 108 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 SNORD66.1-201ENST00000391230 76 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 SNORA48.8-201ENST00000391324 134 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AC097374.1-203ENST00000400783 485 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AL136310.1-201ENST00000404926 654 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AL354719.1-201ENST00000406535 843 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 Z98941.1-201ENST00000407764 100 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 RNU4-22P-201ENST00000411058 166 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 RHEBP3-201ENST00000411920 351 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 RPEP3-201ENST00000425462 676 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 OR5BE1P-201ENST00000425977 939 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 RSL24D1P6-201ENST00000426934 401 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 ATP5F1P1-201ENST00000433775 569 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AC024082.2-201ENST00000434771 238 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AC011276.1-201ENST00000469688 323 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AC108860.1-201ENST00000484521 383 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 MTND4LP22-201ENST00000508209 276 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 HSPA8P13-201ENST00000523715 472 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AC141257.3-201ENST00000572906 215 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 VN1R78P-201ENST00000597393 564 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AL451074.6-201ENST00000608512 729 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AC005962.2-201ENST00000611427 652 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AC006111.3-201ENST00000622137 383 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AC092628.2-201ENST00000622492 339 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 AC116618.1-201ENST00000634617 774 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 OR5BE1P-202ENST00000641168 1176 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 ZNF807-201ENST00000328088 1707 ntBASIC3.6□□□□□ -1.83
C11orf88Q6PI97 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
C11orf88Q6PI97 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 FRG1BP-201ENST00000278882 761 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 RNA5SP175-201ENST00000364275 119 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 RNU1-132P-201ENST00000364300 164 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 MIR659-201ENST00000384963 97 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 OR6C69P-201ENST00000394268 893 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 TAF9BP1-201ENST00000396646 746 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 FAT1P1-201ENST00000406588 507 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 RNU2-43P-201ENST00000410306 190 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 MTATP6P20-201ENST00000414147 562 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 MTCO2P5-201ENST00000422621 426 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 ATP5HP2-201ENST00000433885 485 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 AC096638.2-201ENST00000434965 711 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 OR10R1P-201ENST00000441524 1141 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 RPL23AP43-201ENST00000446445 471 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 OR6K5P-201ENST00000447050 945 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 AL592447.1-201ENST00000447592 540 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 AL031313.1-201ENST00000448435 256 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 RNU6-150P-201ENST00000516237 95 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 AC055876.1-202ENST00000567053 138 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 MIR5186-201ENST00000577504 120 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 AC090615.1-201ENST00000577519 154 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.59□□□□□ -1.83
C11orf88Q6PI97 AL020997.2-201ENST00000602607 184 ntBASIC3.59□□□□□ -1.83
C11orf88Q6PI97 AC013444.2-201ENST00000603317 787 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms